Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NPDNONGE_89 | 11090 | 11794 | WalR | 3.34e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| NPDNONGE_95 | 222 | 419 | CspR | 3.89e-34 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NPDNONGE_1 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_2 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_3 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_4 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_5 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_6 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_7 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_8 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_9 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_10 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_11 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_12 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_13 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_14 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_15 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_16 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_17 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_18 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_19 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_20 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_21 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_22 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_23 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_24 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_25 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_26 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_27 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_28 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_29 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_30 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_31 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_32 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_33 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_34 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_35 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_36 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_37 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_38 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_39 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_40 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_41 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_42 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_43 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_44 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_45 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_46 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_47 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_48 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_49 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_50 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_51 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_52 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_53 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_54 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_55 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_56 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_57 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_58 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_59 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_60 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_61 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_62 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_63 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_64 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_65 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_66 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_67 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_68 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_69 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_70 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_71 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_72 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_73 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_74 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_75 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_76 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_77 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_78 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_79 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_80 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_81 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_82 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_83 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_84 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_85 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_86 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_87 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_88 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_89 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_90 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_91 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_92 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_93 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_94 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_95 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_96 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_97 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_98 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_99 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_100 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_101 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_102 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_103 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_105 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_106 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_107 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_108 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_109 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_110 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_111 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_112 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_113 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_114 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_115 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_116 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_117 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_118 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_120 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_121 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_122 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_123 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_124 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_125 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_126 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_127 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_128 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_129 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_130 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_131 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_132 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_133 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_134 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_135 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_136 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_137 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_138 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_139 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_140 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_141 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_142 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_143 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_144 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_145 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_146 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_147 | 1.0 | 0.0 | 1.0 |
| NPDNONGE_148 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_149 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_150 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_151 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_152 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_153 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_154 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_155 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_156 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_157 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_158 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_159 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_160 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_161 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_162 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_163 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_164 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_165 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_166 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_167 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_168 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_169 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_170 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_171 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_172 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_173 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_174 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_175 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_176 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_177 | 0.0 | 1.0 | 0.0 |
| NPDNONGE_178 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NPDNONGE_91 | 7635 | 37289 | False | Siphoviridae | VOG8241, VOG1309, VOG0186, VOG4566, VOG6238, VOG1638, VOG11003, VOG9860, VOG6623, VOG4693, VOG9741, VOG9759, VOG0152, VOG6815, VOG0198, VOG7136, VOG4570, VOG4549, VOG3699, VOG4544, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG7888 |
| NPDNONGE_96 | 41020 | 50902 | False | Siphoviridae | VOG1581, VOG4632, VOG4606, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568 |
Phigaro v2.4.0 (Database: Jan. 2024 release)