Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IICJFHDI_73 | 28802 | 28098 | WalR | 6.80e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| IICJFHDI_55 | 6263 | 6066 | CspR | 4.16e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IICJFHDI_1 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_2 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_3 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_4 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_5 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_6 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_7 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_8 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_9 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_10 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_11 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_12 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_13 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_14 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_15 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_16 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_17 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_18 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_19 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_20 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_21 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_22 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_23 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_24 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_25 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_26 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_27 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_28 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_29 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_30 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_31 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_32 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_33 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_34 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_35 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_36 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_37 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_38 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_39 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_40 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_41 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_42 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_43 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_44 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_45 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_46 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_47 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_48 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_49 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_50 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_51 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_52 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_53 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_54 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_55 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_56 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_57 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_58 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_59 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_60 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_61 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_62 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_63 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_64 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_65 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_66 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_67 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_68 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_69 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_70 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_71 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_72 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_73 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_74 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_75 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_76 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_77 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_78 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_79 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_80 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_81 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_82 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_83 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_84 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_85 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_86 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_87 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_88 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_89 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_90 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_91 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_92 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_93 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_94 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_95 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_96 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_97 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_98 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_99 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_100 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_101 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_102 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_103 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_104 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_105 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_106 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_107 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_108 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_110 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_111 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_112 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_113 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_114 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_115 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_116 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_117 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_118 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_119 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_120 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_121 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_122 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_123 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_124 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_125 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_126 | 1.0 | 0.0 | 1.0 |
| IICJFHDI_127 | 0.0 | 1.0 | 0.0 |
| IICJFHDI_128 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IICJFHDI_50 | 1456 | 30849 | False | Siphoviridae | VOG9741, VOG0152, VOG4994, VOG3643, VOG6386, VOG0044, VOG2338, VOG0198, VOG4570, VOG3699, VOG4544, VOG0691, VOG0692, VOG5616, VOG1183, VOG4555, VOG4711, VOG0695, VOG0696, VOG0697, VOG0698, VOG5587, VOG5601, VOG9763, VOG0701, VOG4705, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054, VOG4918 |
Phigaro v2.4.0 (Database: Jan. 2024 release)