Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OMJOKBOA_90 | 27024 | 26320 | WalR | 6.85e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| OMJOKBOA_68 | 91541 | 91344 | CspR | 3.75e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OMJOKBOA_59 | 564 | 1123 | rep38 | 561 / 903 | 90.02 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OMJOKBOA_1 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_2 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_3 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_4 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_5 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_6 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_7 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_8 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_9 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_10 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_11 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_12 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_13 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_14 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_15 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_16 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_17 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_18 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_19 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_20 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_21 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_22 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_23 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_24 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_25 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_26 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_27 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_28 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_29 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_30 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_31 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_32 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_33 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_34 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_35 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_36 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_37 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_38 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_39 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_40 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_41 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_42 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_43 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_44 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_45 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_46 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_47 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_48 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_49 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_50 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_51 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_52 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_53 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_54 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_55 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_56 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_57 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_58 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_59 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_60 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_61 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_62 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_63 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_64 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_65 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_67 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_68 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_69 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_70 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_71 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_72 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_73 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_74 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_75 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_76 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_77 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_78 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_79 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_80 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_81 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_82 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_83 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_84 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_85 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_86 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_87 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_88 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_89 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_90 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_91 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_92 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_93 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_94 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_95 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_96 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_97 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_98 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_99 | 0.0 | 1.0 | 0.0 |
| OMJOKBOA_100 | 1.0 | 0.0 | 1.0 |
| OMJOKBOA_101 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OMJOKBOA_24 | 57980 | 64115 | False | Unknown | VOG9667, VOG6495, VOG2338, VOG1309, VOG0186, VOG4855, VOG0189 |
| OMJOKBOA_24 | 69778 | 104777 | False | Siphoviridae | VOG4570, VOG0796, VOG10227, VOG0720, VOG4564, VOG1300, VOG4555, VOG0694, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054, VOG4649, VOG8155, VOG6083, VOG1246, VOG7373 |
Phigaro v2.4.0 (Database: Jan. 2024 release)