Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HBEBEHHM_123 | 8756 | 10681 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| HBEBEHHM_60 | 119 | 919 | ErmF | ARO:3000498 | ErmF | 98.12 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HBEBEHHM_123 | 8756 | 10681 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| HBEBEHHM_60 | 119 | 919 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.25 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HBEBEHHM_123 | 8759 | 10681 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| HBEBEHHM_60 | 119 | 916 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.50 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HBEBEHHM_91 | 41182 | 39602 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.72 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HBEBEHHM_1 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_2 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_3 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_4 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_5 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_6 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_7 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_8 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_9 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_10 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_11 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_12 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_13 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_14 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_15 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_16 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_17 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_18 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_19 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_20 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_21 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_22 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_23 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_24 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_25 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_26 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_27 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_28 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_29 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_30 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_31 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_32 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_33 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_34 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_36 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_37 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_38 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_39 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_40 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_41 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_42 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_43 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_44 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_45 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_46 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_47 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_48 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_49 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_50 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_51 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_52 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_53 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_55 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_56 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_57 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_58 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_59 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_60 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_61 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_62 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_63 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_64 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_65 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_66 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_67 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_68 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_69 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_70 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_71 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_72 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_73 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_74 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_75 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_76 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_77 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_78 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_79 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_80 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_81 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_82 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_83 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_84 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_85 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_86 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_87 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_88 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_89 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_90 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_91 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_92 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_93 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_94 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_95 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_96 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_97 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_98 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_99 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_100 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_101 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_102 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_103 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_104 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_105 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_106 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_107 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_108 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_109 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_110 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_111 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_112 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_113 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_114 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_115 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_116 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_117 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_118 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_119 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_120 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_121 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_122 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_123 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_124 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_125 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_126 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_127 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_128 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_129 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_130 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_131 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_132 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_133 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_134 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_135 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_136 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_137 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_138 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_139 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_140 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_141 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_142 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_143 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_144 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_145 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_146 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_147 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_148 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_149 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_150 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_151 | 1.0 | 0.0 | 1.0 |
| HBEBEHHM_152 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_153 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_154 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_155 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_156 | 0.0 | 1.0 | 0.0 |
| HBEBEHHM_157 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)