Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BHFBBIEN_12 | 69048 | 70253 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| BHFBBIEN_24 | 28943 | 30916 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BHFBBIEN_24 | 28943 | 30868 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BHFBBIEN_12 | 68514 | 69023 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| BHFBBIEN_24 | 28946 | 30868 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
| BHFBBIEN_12 | 69051 | 70253 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BHFBBIEN_77 | 41093 | 42673 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BHFBBIEN_1 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_2 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_3 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_4 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_5 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_6 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_7 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_8 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_9 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_10 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_11 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_12 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_13 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_14 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_15 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_16 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_17 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_18 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_19 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_20 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_21 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_22 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_23 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_24 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_25 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_26 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_27 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_28 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_29 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_30 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_31 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_32 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_33 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_34 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_35 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_36 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_37 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_38 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_39 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_40 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_41 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_42 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_43 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_44 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_45 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_46 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_47 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_48 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_49 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_50 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_51 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_52 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_54 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_55 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_56 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_57 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_58 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_59 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_60 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_61 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_62 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_63 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_64 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_65 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_66 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_67 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_68 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_69 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_70 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_71 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_72 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_73 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_74 | 1.0 | 0.0 | 1.0 |
| BHFBBIEN_75 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_76 | 0.0 | 1.0 | 0.0 |
| BHFBBIEN_77 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BHFBBIEN_7 | 22285 | 38123 | False | Myoviridae | VOG9763, |
Phigaro v2.4.0 (Database: Jan. 2024 release)