Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OJPEJPGD_122 | 59929 | 60894 | CfxA2 | ARO:3003002 | CfxA2 | 99.38 | 100.00 | AF118110.1 |
| OJPEJPGD_33 | 13823 | 15748 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OJPEJPGD_33 | 13823 | 15748 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| OJPEJPGD_122 | 59929 | 60894 | cfxA3 | Ampicillin | 98.55 | 100.00 | AF472622 |
| OJPEJPGD_122 | 59929 | 60894 | cfxA4 | Unknown Beta-lactam | 98.55 | 100.00 | AY769933 |
| OJPEJPGD_122 | 59929 | 60894 | cfxA5 | Unknown Beta-lactam | 98.55 | 100.00 | AY769934 |
| OJPEJPGD_122 | 59929 | 60894 | cfxA | Cefoxitin, Ampicillin | 98.55 | 100.00 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OJPEJPGD_33 | 13823 | 15745 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| OJPEJPGD_122 | 59932 | 60894 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 99.38 | 100.00 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OJPEJPGD_64 | 12432 | 10852 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OJPEJPGD_1 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_2 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_3 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_5 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_6 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_7 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_8 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_9 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_10 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_11 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_12 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_13 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_14 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_15 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_16 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_17 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_18 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_19 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_20 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_22 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_23 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_25 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_26 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_27 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_28 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_29 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_30 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_31 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_32 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_33 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_34 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_35 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_36 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_37 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_38 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_39 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_40 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_41 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_42 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_43 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_44 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_45 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_46 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_47 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_48 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_49 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_50 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_51 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_52 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_53 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_54 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_55 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_56 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_57 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_58 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_59 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_60 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_61 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_62 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_63 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_64 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_65 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_66 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_67 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_68 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_69 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_70 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_71 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_72 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_73 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_74 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_75 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_76 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_77 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_78 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_79 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_80 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_81 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_82 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_83 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_84 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_85 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_86 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_87 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_88 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_89 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_90 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_91 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_92 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_93 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_94 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_95 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_96 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_97 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_98 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_99 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_100 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_101 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_102 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_103 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_104 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_105 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_106 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_107 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_108 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_109 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_110 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_111 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_112 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_113 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_114 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_115 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_116 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_117 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_118 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_119 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_120 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_121 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_122 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_123 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_124 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_125 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_126 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_127 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_128 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_129 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_130 | 0.0 | 1.0 | 0.0 |
| OJPEJPGD_131 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_132 | 1.0 | 0.0 | 1.0 |
| OJPEJPGD_133 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OJPEJPGD_49 | 14532 | 28501 | False | Unknown | VOG0083, |
| OJPEJPGD_101 | 6559 | 13408 | False | Siphoviridae | VOG4544, |
Phigaro v2.4.0 (Database: Jan. 2024 release)