Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DBCIJPCJ_98 | 111887 | 113467 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DBCIJPCJ_1 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_2 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_3 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_4 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_5 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_6 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_7 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_8 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_9 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_10 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_11 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_12 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_13 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_14 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_15 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_16 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_17 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_18 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_19 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_20 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_21 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_22 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_23 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_24 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_25 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_26 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_27 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_28 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_29 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_30 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_31 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_32 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_33 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_34 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_35 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_36 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_37 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_38 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_39 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_40 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_41 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_42 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_43 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_44 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_45 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_46 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_47 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_48 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_49 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_50 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_51 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_52 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_53 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_54 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_55 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_56 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_57 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_58 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_59 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_60 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_61 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_62 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_63 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_64 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_65 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_66 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_67 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_68 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_69 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_70 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_71 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_72 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_73 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_74 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_75 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_76 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_77 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_79 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_80 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_81 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_82 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_83 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_84 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_85 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_86 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_87 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_88 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_89 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_90 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_91 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_92 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_93 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_94 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_95 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_96 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_97 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_98 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_99 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_100 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_101 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_102 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_103 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_104 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_105 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_106 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_107 | 1.0 | 0.0 | 1.0 |
| DBCIJPCJ_108 | 0.0 | 1.0 | 0.0 |
| DBCIJPCJ_109 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DBCIJPCJ_11 | 10587 | 22919 | False | Myoviridae | VOG0372, |
| DBCIJPCJ_11 | 67833 | 78494 | False | Unknown | VOG0025, |
Phigaro v2.4.0 (Database: Jan. 2024 release)