Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 1 | 6.08 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MAELHGDP_56 | 126619 | 128544 | tet(Q) | ARO:3000191 | tet(Q) | 97.35 | 97.56 | Z21523.1 |
| MAELHGDP_44 | 5675 | 6583 | aad(6) | ARO:3002628 | aad(6) | 100.00 | 109.42 | AY712687.1 |
| MAELHGDP_44 | 5136 | 5666 | SAT-4 | ARO:3002897 | SAT-4 | 99.43 | 97.78 | U01945.1 |
| MAELHGDP_44 | 2990 | 3785 | APH(3')-IIIa | ARO:3002647 | APH(3')-IIIa | 100.00 | 98.86 | CP004067.1 |
| MAELHGDP_105 | 1 | 885 | CfxA5 | ARO:3003096 | CfxA5 | 100.00 | 91.59 | AY769934.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MAELHGDP_44 | 5675 | 6583 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | AF330699 |
| MAELHGDP_44 | 2990 | 3784 | aph(3')-III | Kanamycin, Amikacin, Neomycin, Butirosin, Isepamicin, Lividomycin, Paromomycin, Ribostamycin | 100.00 | 100.00 | M26832 |
| MAELHGDP_105 | 1 | 885 | cfxA5 | Unknown Beta-lactam | 100.00 | 91.61 | AY769934 |
| MAELHGDP_56 | 126619 | 128544 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.04 | 100.00 | L33696 |
| MAELHGDP_44 | 8214 | 9431 | mef(A) | Erythromycin, Azithromycin | 95.16 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MAELHGDP_44 | 5678 | 6583 | ant(6)-Ia | aminoglycoside nucleotidyltransferase ANT(6)-Ia | EXACTX | 100.00 | 100.00 | WP_001255866.1 |
| MAELHGDP_44 | 2993 | 3784 | aph(3')-IIIa | aminoglycoside O-phosphotransferase APH(3')-IIIa | EXACTX | 100.00 | 100.00 | WP_001096887.1 |
| MAELHGDP_44 | 5139 | 5678 | sat4 | streptothricin N-acetyltransferase Sat4 | EXACTX | 100.00 | 100.00 | WP_000627290.1 |
| MAELHGDP_105 | 1 | 882 | cfxA5 | broad-spectrum class A beta-lactamase CfxA5 | BLASTX | 100.00 | 91.59 | WP_032946415.1 |
| MAELHGDP_44 | 8217 | 9431 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 98.77 | 99.26 | WP_012102963.1 |
| MAELHGDP_56 | 126619 | 128541 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.35 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MAELHGDP_27 | 72600 | 71020 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.72 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MAELHGDP_10 | 1202 | 1881 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MAELHGDP_1 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_2 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_3 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_4 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_5 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_6 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_7 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_8 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_9 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_10 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_11 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_12 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_13 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_14 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_15 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_16 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_17 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_18 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_20 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_21 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_22 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_23 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_25 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_26 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_27 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_28 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_29 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_30 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_31 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_32 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_33 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_34 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_35 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_36 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_37 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_38 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_39 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_40 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_41 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_42 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_43 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_44 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_45 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_46 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_47 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_48 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_49 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_50 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_51 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_52 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_53 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_54 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_55 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_56 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_57 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_58 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_59 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_60 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_61 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_62 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_63 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_64 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_65 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_66 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_67 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_68 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_69 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_70 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_71 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_72 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_73 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_74 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_75 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_76 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_77 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_78 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_79 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_80 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_81 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_82 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_83 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_84 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_85 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_86 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_87 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_88 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_89 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_90 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_91 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_92 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_93 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_94 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_95 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_96 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_97 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_98 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_99 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_100 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_101 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_102 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_103 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_104 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_105 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_106 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_107 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_108 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_109 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_110 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_111 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_112 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_113 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_114 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_115 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_116 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_117 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_118 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_119 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_120 | 1.0 | 0.0 | 1.0 |
| MAELHGDP_121 | 0.0 | 1.0 | 0.0 |
| MAELHGDP_122 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MAELHGDP_122 | 34710 | 47273 | False | Myoviridae | / |
Phigaro v2.4.0 (Database: Jan. 2024 release)