Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KIJBHLEI_27 | 28461 | 29426 | CfxA3 | ARO:3003003 | CfxA3 | 99.69 | 100.00 | AF472622.2 |
| KIJBHLEI_12 | 9837 | 10727 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KIJBHLEI_27 | 28461 | 29426 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KIJBHLEI_12 | 9840 | 10727 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| KIJBHLEI_27 | 28464 | 29426 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | BLASTX | 99.69 | 100.00 | WP_004348227.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KIJBHLEI_1 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_2 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_3 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_4 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_5 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_6 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_7 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_8 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_9 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_10 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_11 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_12 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_13 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_14 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_15 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_16 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_17 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_18 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_19 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_20 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_21 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_22 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_23 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_24 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_25 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_26 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_27 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_28 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_29 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_30 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_31 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_32 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_33 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_34 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_35 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_36 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_37 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_38 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_39 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_40 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_41 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_42 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_43 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_44 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_45 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_46 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_47 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_48 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_50 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_51 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_52 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_53 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_54 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_55 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_56 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_57 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_58 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_59 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_60 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_61 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_62 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_63 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_65 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_66 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_67 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_68 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_69 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_70 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_71 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_72 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_73 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_74 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_75 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_76 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_77 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_78 | 1.0 | 0.0 | 1.0 |
| KIJBHLEI_79 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_80 | 0.0 | 1.0 | 0.0 |
| KIJBHLEI_81 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KIJBHLEI_3 | 110967 | 125151 | False | Siphoviridae | VOG2703, |
Phigaro v2.4.0 (Database: Jan. 2024 release)