Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MHFPLCIJ_77 | 148066 | 149031 | CfxA4 | ARO:3003005 | CfxA4 | 100.00 | 100.00 | AY769933.1 |
| MHFPLCIJ_7 | 36976 | 37866 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| MHFPLCIJ_40 | 13458 | 15383 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| MHFPLCIJ_40 | 8174 | 8989 | sul2 | ARO:3000412 | sul2 | 100.00 | 100.00 | AY055428.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MHFPLCIJ_34 | 1896 | 2762 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| MHFPLCIJ_77 | 148066 | 149031 | cfxA4 | Unknown Beta-lactam | 100.00 | 100.00 | AY769933 |
| MHFPLCIJ_40 | 8174 | 8989 | sul2 | Sulfamethoxazole | 100.00 | 100.00 | AY034138 |
| MHFPLCIJ_40 | 13458 | 15383 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MHFPLCIJ_34 | 1896 | 2759 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| MHFPLCIJ_7 | 36976 | 37863 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| MHFPLCIJ_77 | 148066 | 149028 | cfxA4 | extended-spectrum class A beta-lactamase CfxA4 | EXACTX | 100.00 | 100.00 | WP_057280848.1 |
| MHFPLCIJ_40 | 8174 | 8986 | sul2 | sulfonamide-resistant dihydropteroate synthase Sul2 | EXACTX | 100.00 | 100.00 | WP_001043260.1 |
| MHFPLCIJ_40 | 13461 | 15383 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MHFPLCIJ_1 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_2 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_3 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_4 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_5 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_6 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_7 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_8 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_9 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_10 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_11 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_12 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_13 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_14 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_15 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_16 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_17 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_18 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_19 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_20 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_21 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_22 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_23 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_24 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_25 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_26 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_27 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_28 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_29 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_30 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_31 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_32 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_33 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_34 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_35 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_36 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_37 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_38 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_39 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_40 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_41 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_42 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_43 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_44 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_45 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_46 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_47 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_48 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_49 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_50 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_51 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_52 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_53 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_54 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_55 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_56 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_57 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_58 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_59 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_60 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_61 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_62 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_63 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_64 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_66 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_67 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_68 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_69 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_70 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_71 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_72 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_73 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_74 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_75 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_76 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_77 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_78 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_79 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_80 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_81 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_82 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_83 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_84 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_85 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_86 | 1.0 | 0.0 | 1.0 |
| MHFPLCIJ_87 | 0.0 | 1.0 | 0.0 |
| MHFPLCIJ_88 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MHFPLCIJ_9 | 64508 | 76274 | False | Siphoviridae | VOG0749, |
Phigaro v2.4.0 (Database: Jan. 2024 release)