Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AEEPLIAO_11 | 376745 | 377635 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| AEEPLIAO_62 | 3313 | 4047 | ErmG | ARO:3000522 | ErmG | 100.00 | 100.00 | L42817.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AEEPLIAO_62 | 3313 | 4047 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | L42817 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AEEPLIAO_11 | 376745 | 377632 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| AEEPLIAO_62 | 3316 | 4047 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | EXACTX | 100.00 | 100.00 | WP_063844787.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AEEPLIAO_54 | 542 | 1122 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AEEPLIAO_1 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_2 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_3 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_4 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_5 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_6 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_7 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_8 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_9 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_10 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_11 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_12 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_13 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_14 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_15 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_16 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_17 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_18 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_19 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_20 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_21 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_22 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_23 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_24 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_25 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_26 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_27 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_28 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_29 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_30 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_31 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_32 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_33 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_34 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_35 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_36 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_37 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_38 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_39 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_40 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_41 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_42 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_43 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_44 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_45 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_46 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_47 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_48 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_50 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_51 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_52 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_53 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_54 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_55 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_56 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_57 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_58 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_59 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_60 | 1.0 | 0.0 | 1.0 |
| AEEPLIAO_61 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_62 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_63 | 0.0 | 1.0 | 0.0 |
| AEEPLIAO_64 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AEEPLIAO_55 | 7061 | 16396 | True | Siphoviridae | VOG0275, |
Phigaro v2.4.0 (Database: Jan. 2024 release)