Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCOELBAM_73 | 12893 | 13858 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| KCOELBAM_22 | 9837 | 10727 | CblA-1 | ARO:3002999 | CblA-1 | 99.32 | 100.00 | GQ343019.1 |
| KCOELBAM_30 | 3311 | 4045 | ErmG | ARO:3000522 | ErmG | 100.00 | 100.00 | L42817.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KCOELBAM_73 | 12893 | 13858 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| KCOELBAM_30 | 3311 | 4045 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | L42817 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCOELBAM_73 | 12896 | 13858 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| KCOELBAM_30 | 3314 | 4045 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | EXACTX | 100.00 | 100.00 | WP_063844787.1 |
| KCOELBAM_22 | 9840 | 10727 | cblA | CblA family class A beta-lactamase | BLASTX | 99.32 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KCOELBAM_83 | 1333 | 2012 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KCOELBAM_1 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_2 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_3 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_4 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_5 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_6 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_7 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_8 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_9 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_10 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_11 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_12 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_13 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_14 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_15 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_16 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_17 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_18 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_19 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_20 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_21 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_22 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_23 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_24 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_25 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_26 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_27 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_28 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_29 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_30 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_31 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_32 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_33 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_34 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_35 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_36 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_37 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_38 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_39 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_40 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_41 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_42 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_43 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_44 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_45 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_46 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_47 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_48 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_49 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_50 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_51 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_52 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_53 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_54 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_55 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_56 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_57 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_58 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_59 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_60 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_61 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_62 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_63 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_64 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_65 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_66 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_67 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_68 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_70 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_71 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_72 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_73 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_74 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_75 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_76 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_77 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_78 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_79 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_80 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_81 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_82 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_83 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_84 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_85 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_86 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_87 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_88 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_90 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_91 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_92 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_93 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_94 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_95 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_96 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_97 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_98 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_99 | 0.0 | 1.0 | 0.0 |
| KCOELBAM_100 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_101 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_102 | 1.0 | 0.0 | 1.0 |
| KCOELBAM_103 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KCOELBAM_37 | 24010 | 38542 | True | Myoviridae | / |
Phigaro v2.4.0 (Database: Jan. 2024 release)