Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JFAGBGHC_184 | 31218 | 33143 | tet(Q) | ARO:3000191 | tet(Q) | 99.84 | 97.56 | Z21523.1 |
| JFAGBGHC_197 | 14144 | 14881 | ErmB | ARO:3000375 | ErmB | 97.96 | 98.79 | AF242872.1 |
| JFAGBGHC_74 | 4199 | 5089 | CblA-1 | ARO:3002999 | CblA-1 | 98.99 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JFAGBGHC_184 | 31218 | 33143 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.95 | 100.00 | Z21523 |
| JFAGBGHC_197 | 14144 | 14881 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.73 | 100.00 | U18931 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JFAGBGHC_184 | 31221 | 33143 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.84 | 100.00 | WP_002560998.1 |
| JFAGBGHC_197 | 14147 | 14881 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.18 | 100.00 | WP_002292226.1 |
| JFAGBGHC_74 | 4202 | 5089 | cblA | CblA family class A beta-lactamase | BLASTX | 98.99 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JFAGBGHC_116 | 408 | 1087 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JFAGBGHC_1 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_2 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_3 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_4 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_5 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_6 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_7 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_8 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_9 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_10 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_11 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_12 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_13 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_14 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_15 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_16 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_17 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_18 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_19 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_20 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_21 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_22 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_23 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_24 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_25 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_26 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_27 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_28 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_29 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_30 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_31 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_32 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_33 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_34 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_35 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_36 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_37 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_38 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_39 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_40 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_41 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_42 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_43 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_44 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_45 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_46 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_47 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_48 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_49 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_50 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_51 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_52 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_53 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_54 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_55 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_56 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_57 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_58 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_59 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_60 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_61 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_62 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_63 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_64 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_65 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_66 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_67 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_68 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_70 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_71 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_72 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_73 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_74 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_75 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_76 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_77 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_78 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_79 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_80 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_81 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_82 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_83 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_84 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_85 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_86 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_87 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_88 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_89 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_90 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_91 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_92 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_93 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_94 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_95 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_96 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_97 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_98 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_99 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_100 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_101 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_102 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_103 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_104 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_105 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_106 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_107 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_108 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_109 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_110 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_111 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_112 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_113 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_114 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_115 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_116 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_117 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_118 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_119 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_120 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_121 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_122 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_123 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_124 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_125 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_126 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_127 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_128 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_129 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_130 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_131 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_132 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_133 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_134 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_135 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_136 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_137 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_138 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_139 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_140 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_141 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_142 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_143 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_144 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_145 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_146 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_147 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_148 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_149 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_150 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_151 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_152 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_153 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_154 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_155 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_156 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_157 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_158 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_159 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_160 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_161 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_162 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_163 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_164 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_165 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_166 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_167 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_168 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_169 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_170 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_171 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_172 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_173 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_174 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_175 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_176 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_177 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_178 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_179 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_180 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_181 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_182 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_183 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_184 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_185 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_186 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_187 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_188 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_189 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_190 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_191 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_192 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_193 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_194 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_195 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_196 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_197 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_198 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_199 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_200 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_201 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_202 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_203 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_204 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_205 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_206 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_207 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_208 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_209 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_210 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_211 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_212 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_213 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_214 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_215 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_216 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_217 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_218 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_219 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_220 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_221 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_222 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_223 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_224 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_225 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_226 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_227 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_228 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_229 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_230 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_231 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_232 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_233 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_234 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_235 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_236 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_237 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_238 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_239 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_240 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_241 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_242 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_243 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_244 | 1.0 | 0.0 | 1.0 |
| JFAGBGHC_245 | 0.0 | 1.0 | 0.0 |
| JFAGBGHC_246 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JFAGBGHC_163 | 7498 | 15671 | False | Siphoviridae | VOG1410, |
Phigaro v2.4.0 (Database: Jan. 2024 release)