Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LKOBMCOB_89 | 125416 | 126306 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| LKOBMCOB_33 | 6947 | 8872 | tet(Q) | ARO:3000191 | tet(Q) | 97.66 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LKOBMCOB_33 | 6947 | 8872 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.46 | 100.00 | X58717 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LKOBMCOB_89 | 125416 | 126303 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| LKOBMCOB_33 | 6950 | 8872 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.82 | 100.00 | WP_004293868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LKOBMCOB_1 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_2 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_3 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_4 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_5 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_6 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_7 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_8 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_9 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_10 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_11 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_12 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_13 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_14 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_15 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_16 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_17 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_18 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_19 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_20 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_21 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_22 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_23 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_24 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_25 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_26 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_27 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_28 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_29 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_30 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_31 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_32 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_33 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_34 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_35 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_36 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_37 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_38 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_39 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_40 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_41 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_42 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_43 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_44 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_45 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_46 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_47 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_48 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_49 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_50 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_51 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_52 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_54 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_55 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_56 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_57 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_58 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_59 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_60 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_61 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_62 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_63 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_64 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_65 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_66 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_67 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_68 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_69 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_70 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_71 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_72 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_73 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_74 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_75 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_76 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_77 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_78 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_79 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_80 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_81 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_82 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_83 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_84 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_85 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_86 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_87 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_88 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_89 | 0.0 | 1.0 | 0.0 |
| LKOBMCOB_90 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_91 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_92 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_93 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_94 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_95 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_96 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_97 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_98 | 1.0 | 0.0 | 1.0 |
| LKOBMCOB_99 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)