safety

PPRS ARGs VFs PGs Plasmid Prophage IS elements

ARGs	VFs	PGs	PPRS
6	0	0	6.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Comprehensive Antibiotic Resistance Database (CARD)

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
MIBPKNPP_22	197465	198430	CfxA4	ARO:3003005	CfxA4	100.00	100.00	AY769933.1
MIBPKNPP_2	158467	159357	CblA-1	ARO:3002999	CblA-1	98.99	100.00	GQ343019.1
MIBPKNPP_2	156607	157497	CblA-1	ARO:3002999	CblA-1	98.99	100.00	GQ343019.1
MIBPKNPP_33	119232	119966	ErmG	ARO:3000522	ErmG	99.18	100.00	L42817.1
MIBPKNPP_13	25826	27031	Mef(En2)	ARO:3004659	Mef(En2)	99.25	100.00	AF251288.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
MIBPKNPP_22	197465	198430	cfxA4	Unknown Beta-lactam	100.00	100.00	AY769933
MIBPKNPP_33	119232	119966	erm(G)	Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S	99.32	100.00	M15332

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
MIBPKNPP_22	197465	198427	cfxA4	extended-spectrum class A beta-lactamase CfxA4	EXACTX	100.00	100.00	WP_057280848.1
MIBPKNPP_13	27056	27565	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	EXACTX	100.00	100.00	WP_004308783.1
MIBPKNPP_33	119235	119966	erm(G)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G)	BLASTX	99.59	100.00	WP_063844791.1
MIBPKNPP_13	25826	27028	mef(En2)	macrolide efflux MFS transporter Mef(En2)	BLASTX	99.25	100.00	WP_063853729.1
MIBPKNPP_2	156607	157494	cblA	CblA family class A beta-lactamase	BLASTX	98.99	100.00	WP_005827792.1
MIBPKNPP_2	158467	159354	cblA	CblA family class A beta-lactamase	BLASTX	98.99	100.00	WP_005827792.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

PlasmidFinder

Query ID	Begin	End	Plasmid	Query / Template	Identity	Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID	Prediction	Chromosome	Plasmid
MIBPKNPP_1	0.0	1.0	0.0
MIBPKNPP_2	0.0	1.0	0.0
MIBPKNPP_3	0.0	1.0	0.0
MIBPKNPP_4	0.0	1.0	0.0
MIBPKNPP_5	0.0	1.0	0.0
MIBPKNPP_6	0.0	1.0	0.0
MIBPKNPP_7	0.0	1.0	0.0
MIBPKNPP_8	0.0	1.0	0.0
MIBPKNPP_9	0.0	1.0	0.0
MIBPKNPP_10	0.0	1.0	0.0
MIBPKNPP_11	0.0	1.0	0.0
MIBPKNPP_12	0.0	1.0	0.0
MIBPKNPP_13	0.0	1.0	0.0
MIBPKNPP_14	0.0	1.0	0.0
MIBPKNPP_15	0.0	1.0	0.0
MIBPKNPP_16	1.0	0.0	1.0
MIBPKNPP_17	1.0	0.0	1.0
MIBPKNPP_18	1.0	0.0	1.0
MIBPKNPP_19	1.0	0.0	1.0
MIBPKNPP_20	0.0	1.0	0.0
MIBPKNPP_22	0.0	1.0	0.0
MIBPKNPP_23	1.0	0.0	1.0
MIBPKNPP_24	1.0	0.0	1.0
MIBPKNPP_25	1.0	0.0	1.0
MIBPKNPP_26	0.0	1.0	0.0
MIBPKNPP_27	1.0	0.0	1.0
MIBPKNPP_28	1.0	0.0	1.0
MIBPKNPP_29	1.0	0.0	1.0
MIBPKNPP_30	0.0	1.0	0.0
MIBPKNPP_31	0.0	1.0	0.0
MIBPKNPP_32	0.0	1.0	0.0
MIBPKNPP_33	0.0	1.0	0.0
MIBPKNPP_34	0.0	1.0	0.0
MIBPKNPP_35	0.0	1.0	0.0
MIBPKNPP_36	0.0	1.0	0.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Phigaro

Query ID	Begin	End	Transposable	Taxonomy	pVOGs
MIBPKNPP_4	14219	19143	True	Unknown	VOG0275,
MIBPKNPP_22	319654	330834	False	Unknown	VOG1093,

Phigaro v2.4.0 (Database: Jan. 2024 release)