Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IODIJMFA_9 | 72451 | 73341 | CblA-1 | ARO:3002999 | CblA-1 | 99.66 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IODIJMFA_14 | 63821 | 64771 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| IODIJMFA_14 | 63821 | 64771 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| IODIJMFA_14 | 63821 | 64771 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| IODIJMFA_14 | 63821 | 64771 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IODIJMFA_9 | 72454 | 73341 | cblA | CblA family class A beta-lactamase | BLASTX | 99.66 | 100.00 | WP_005827792.1 |
| IODIJMFA_14 | 63819 | 64772 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IODIJMFA_1 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_2 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_3 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_4 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_5 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_6 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_7 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_8 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_9 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_10 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_11 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_12 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_13 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_14 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_15 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_16 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_17 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_18 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_19 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_20 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_21 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_22 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_23 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_24 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_25 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_26 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_27 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_28 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_29 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_30 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_31 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_32 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_33 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_34 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_35 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_36 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_37 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_38 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_39 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_40 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_41 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_42 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_43 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_44 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_45 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_46 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_47 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_48 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_49 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_50 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_51 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_52 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_53 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_54 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_55 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_56 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_57 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_58 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_59 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_60 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_62 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_63 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_64 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_65 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_66 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_67 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_68 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_69 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_70 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_71 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_72 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_73 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_74 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_75 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_76 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_77 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_78 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_79 | 1.0 | 0.0 | 1.0 |
| IODIJMFA_80 | 0.0 | 1.0 | 0.0 |
| IODIJMFA_81 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IODIJMFA_29 | 22361 | 26379 | False | Unknown | VOG1198, |
Phigaro v2.4.0 (Database: Jan. 2024 release)