Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| PPILPDAA_47 | 1407 | 1666 | Col(MG828) | 260 / 262 | 94.62 | NC008486 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PPILPDAA_1 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_2 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_3 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_4 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_5 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_6 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_7 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_8 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_9 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_10 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_11 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_12 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_13 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_14 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_15 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_16 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_17 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_18 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_19 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_20 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_21 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_22 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_23 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_24 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_25 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_26 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_27 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_28 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_29 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_30 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_31 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_32 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_33 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_34 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_35 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_36 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_37 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_38 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_39 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_40 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_41 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_42 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_43 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_44 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_46 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_47 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_48 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_49 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_50 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_51 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_52 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_53 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_54 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_55 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_56 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_57 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_58 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_59 | 1.0 | 0.0 | 1.0 |
| PPILPDAA_60 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_61 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_62 | 0.0 | 1.0 | 0.0 |
| PPILPDAA_63 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PPILPDAA_5 | 131895 | 141089 | False | Siphoviridae | VOG7238, |
| PPILPDAA_11 | 368418 | 373031 | False | Siphoviridae | VOG0204, |
Phigaro v2.4.0 (Database: Jan. 2024 release)