Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MANCMMPO_1 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_2 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_3 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_4 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_5 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_6 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_7 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_8 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_9 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_10 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_11 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_12 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_13 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_14 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_15 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_16 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_17 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_18 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_19 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_20 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_21 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_22 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_23 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_24 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_25 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_26 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_27 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_28 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_29 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_30 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_31 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_32 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_33 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_34 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_35 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_36 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_37 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_38 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_39 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_40 | 1.0 | 0.0 | 1.0 |
| MANCMMPO_41 | 1.0 | 0.0 | 1.0 |
| MANCMMPO_42 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_44 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_45 | 1.0 | 0.0 | 1.0 |
| MANCMMPO_46 | 1.0 | 0.0 | 1.0 |
| MANCMMPO_47 | 1.0 | 0.0 | 1.0 |
| MANCMMPO_48 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_49 | 1.0 | 0.0 | 1.0 |
| MANCMMPO_50 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_51 | 1.0 | 0.0 | 1.0 |
| MANCMMPO_52 | 1.0 | 0.0 | 1.0 |
| MANCMMPO_53 | 1.0 | 0.0 | 1.0 |
| MANCMMPO_54 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_55 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_56 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_57 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_58 | 0.0 | 1.0 | 0.0 |
| MANCMMPO_59 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MANCMMPO_4 | 131886 | 141080 | False | Siphoviridae | VOG7238, |
| MANCMMPO_11 | 3922 | 8535 | False | Siphoviridae | VOG4556, |
Phigaro v2.4.0 (Database: Jan. 2024 release)