Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KFFAMCAF_6 | 74846 | 75811 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
| KFFAMCAF_35 | 49399 | 51345 | tet(Q) | ARO:3000191 | tet(Q) | 96.39 | 98.63 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KFFAMCAF_6 | 74846 | 75811 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| KFFAMCAF_6 | 74846 | 75811 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| KFFAMCAF_6 | 74846 | 75811 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| KFFAMCAF_6 | 74846 | 75811 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| KFFAMCAF_35 | 49433 | 51345 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 99.33 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KFFAMCAF_6 | 74849 | 75811 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| KFFAMCAF_35 | 49432 | 51345 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.37 | 99.53 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KFFAMCAF_1 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_2 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_3 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_4 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_5 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_6 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_7 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_8 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_9 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_10 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_11 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_12 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_13 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_14 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_15 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_16 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_17 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_18 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_19 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_20 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_21 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_22 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_23 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_24 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_25 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_26 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_27 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_28 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_29 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_30 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_31 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_32 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_33 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_34 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_35 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_36 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_37 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_38 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_39 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_40 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_41 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_42 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_43 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_44 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_45 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_46 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_47 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_48 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_49 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_50 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_51 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_52 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_53 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_54 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_55 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_56 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_57 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_58 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_59 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_60 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_61 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_62 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_63 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_64 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_65 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_66 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_67 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_68 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_69 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_70 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_71 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_72 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_73 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_74 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_75 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_77 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_78 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_79 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_80 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_81 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_82 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_83 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_84 | 1.0 | 0.0 | 1.0 |
| KFFAMCAF_86 | 0.0 | 1.0 | 0.0 |
| KFFAMCAF_87 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)