Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ICNLHEHA_9 | 3313 | 4047 | ErmG | ARO:3000522 | ErmG | 100.00 | 100.00 | L42817.1 |
| ICNLHEHA_23 | 63 | 1028 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ICNLHEHA_23 | 63 | 1028 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| ICNLHEHA_9 | 3313 | 4047 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | L42817 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ICNLHEHA_23 | 63 | 1025 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| ICNLHEHA_9 | 3316 | 4047 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | EXACTX | 100.00 | 100.00 | WP_063844787.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| ICNLHEHA_82 | 2197 | 2777 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ICNLHEHA_1 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_2 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_3 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_4 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_5 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_6 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_7 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_8 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_9 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_10 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_11 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_12 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_13 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_14 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_15 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_16 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_17 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_18 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_19 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_20 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_21 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_22 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_23 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_24 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_25 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_26 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_27 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_28 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_29 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_30 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_31 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_32 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_33 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_34 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_35 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_36 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_37 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_38 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_39 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_40 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_41 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_42 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_43 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_44 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_45 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_46 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_47 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_48 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_49 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_50 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_51 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_52 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_53 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_54 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_55 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_56 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_57 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_58 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_59 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_60 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_61 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_62 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_63 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_64 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_65 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_66 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_67 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_68 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_69 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_70 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_71 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_72 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_73 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_74 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_75 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_77 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_78 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_79 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_80 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_81 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_82 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_83 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_85 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_86 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_87 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_88 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_89 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_91 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_92 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_93 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_94 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_95 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_96 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_97 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_98 | 1.0 | 0.0 | 1.0 |
| ICNLHEHA_99 | 0.0 | 1.0 | 0.0 |
| ICNLHEHA_100 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ICNLHEHA_13 | 39210 | 46855 | False | Unknown | VOG0159, |
| ICNLHEHA_23 | 60349 | 72219 | False | Unknown | VOG5821, |
| ICNLHEHA_89 | 36211 | 44627 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)