Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BIKJJIKF_44 | 9721 | 10455 | ErmG | ARO:3000522 | ErmG | 100.00 | 100.00 | L42817.1 |
| BIKJJIKF_44 | 2 | 1435 | tet(Q) | ARO:3000191 | tet(Q) | 96.44 | 72.75 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BIKJJIKF_44 | 9721 | 10455 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | L42817 |
| BIKJJIKF_44 | 1 | 1435 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.49 | 74.51 | X58717 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BIKJJIKF_44 | 9724 | 10455 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | EXACTX | 100.00 | 100.00 | WP_063844787.1 |
| BIKJJIKF_44 | 2 | 1435 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 96.65 | 74.57 | WP_004293868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BIKJJIKF_1 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_2 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_3 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_4 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_5 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_6 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_7 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_8 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_9 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_10 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_11 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_12 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_13 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_14 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_15 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_16 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_17 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_18 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_19 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_20 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_21 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_22 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_23 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_24 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_25 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_26 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_27 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_28 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_29 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_30 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_31 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_32 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_33 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_34 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_35 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_36 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_37 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_38 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_39 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_40 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_41 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_42 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_43 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_44 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_45 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_46 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_47 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_48 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_49 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_50 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_51 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_53 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_54 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_55 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_56 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_57 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_58 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_59 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_60 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_61 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_62 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_63 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_64 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_65 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_66 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_67 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_68 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_69 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_70 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_71 | 1.0 | 0.0 | 1.0 |
| BIKJJIKF_72 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_73 | 0.0 | 1.0 | 0.0 |
| BIKJJIKF_74 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)