Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 9 | 0 | 0 | 9.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AMHPLBOG_115 | 7307 | 9253 | tet(Q) | ARO:3000191 | tet(Q) | 96.24 | 98.63 | Z21523.1 |
| AMHPLBOG_122 | 3685 | 5658 | tet(Q) | ARO:3000191 | tet(Q) | 97.11 | 100.00 | Z21523.1 |
| AMHPLBOG_130 | 2436 | 2978 | SAT-4 | ARO:3002897 | SAT-4 | 99.44 | 100.00 | U01945.1 |
| AMHPLBOG_130 | 1549 | 2343 | APH(3')-IIIa | ARO:3002647 | APH(3')-IIIa | 100.00 | 100.00 | CP004067.1 |
| AMHPLBOG_19 | 358 | 1497 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| AMHPLBOG_34 | 140 | 1306 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
| AMHPLBOG_85 | 114 | 977 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AMHPLBOG_64 | 1295 | 2161 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| AMHPLBOG_130 | 1549 | 2343 | aph(3')-III | Kanamycin, Amikacin, Neomycin, Butirosin, Isepamicin, Lividomycin, Paromomycin, Ribostamycin | 100.00 | 100.00 | M26832 |
| AMHPLBOG_122 | 3685 | 5610 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
| AMHPLBOG_34 | 140 | 1306 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AMHPLBOG_64 | 1295 | 2158 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| AMHPLBOG_85 | 114 | 974 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| AMHPLBOG_130 | 1552 | 2343 | aph(3')-IIIa | aminoglycoside O-phosphotransferase APH(3')-IIIa | EXACTX | 100.00 | 100.00 | WP_001096887.1 |
| AMHPLBOG_98 | 100324 | 101229 | blaMUN-1 | MUN family extended-spectrum class A beta-lactamase MUN-1 | ALLELEX | 100.00 | 100.00 | WP_206340447.1 |
| AMHPLBOG_130 | 2439 | 2978 | sat4 | streptothricin N-acetyltransferase Sat4 | EXACTX | 100.00 | 100.00 | WP_000627290.1 |
| AMHPLBOG_122 | 3688 | 5610 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
| AMHPLBOG_19 | 358 | 1494 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| AMHPLBOG_34 | 143 | 1306 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| AMHPLBOG_115 | 7340 | 9253 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.37 | 99.53 | WP_063856409.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AMHPLBOG_5 | 1 | 545 | repUS2 | 547 / 681 | 98.72 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AMHPLBOG_1 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_2 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_3 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_4 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_5 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_6 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_7 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_8 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_9 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_10 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_11 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_12 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_13 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_14 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_15 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_16 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_17 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_18 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_19 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_20 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_21 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_22 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_23 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_24 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_25 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_26 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_27 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_28 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_29 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_30 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_31 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_32 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_33 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_34 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_35 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_36 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_37 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_38 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_39 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_40 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_41 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_42 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_43 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_44 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_45 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_46 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_47 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_48 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_49 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_50 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_51 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_52 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_53 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_54 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_55 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_56 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_57 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_58 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_59 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_60 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_61 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_62 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_63 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_64 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_65 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_66 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_67 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_68 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_69 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_70 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_71 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_72 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_73 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_74 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_75 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_76 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_77 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_78 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_79 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_80 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_81 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_82 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_83 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_84 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_85 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_86 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_87 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_88 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_89 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_90 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_91 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_92 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_93 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_94 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_95 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_96 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_97 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_98 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_99 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_100 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_101 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_102 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_103 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_104 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_105 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_106 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_107 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_108 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_109 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_110 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_111 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_112 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_113 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_114 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_115 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_116 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_117 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_118 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_119 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_120 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_121 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_122 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_123 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_124 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_125 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_126 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_127 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_128 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_129 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_130 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_131 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_132 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_133 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_134 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_136 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_137 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_138 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_139 | 1.0 | 0.0 | 1.0 |
| AMHPLBOG_140 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_141 | 0.0 | 1.0 | 0.0 |
| AMHPLBOG_142 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AMHPLBOG_86 | 8001 | 20443 | False | Siphoviridae | VOG10767, |
Phigaro v2.4.0 (Database: Jan. 2024 release)