Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBEFILGH_53 | 17335 | 19308 | tet(Q) | ARO:3000191 | tet(Q) | 97.11 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IBEFILGH_53 | 17335 | 19260 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBEFILGH_53 | 17338 | 19260 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IBEFILGH_1 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_2 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_3 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_4 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_5 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_6 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_7 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_8 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_9 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_10 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_11 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_12 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_13 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_14 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_15 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_16 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_17 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_18 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_19 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_20 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_21 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_22 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_23 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_24 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_25 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_26 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_27 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_28 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_29 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_30 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_31 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_32 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_33 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_34 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_35 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_36 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_37 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_38 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_39 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_40 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_41 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_42 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_43 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_44 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_45 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_46 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_47 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_48 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_49 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_50 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_51 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_52 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_53 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_54 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_55 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_56 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_57 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_58 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_59 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_60 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_61 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_62 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_63 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_64 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_65 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_66 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_67 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_68 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_69 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_70 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_71 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_72 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_73 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_75 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_76 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_77 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_78 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_79 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_80 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_81 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_82 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_83 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_84 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_85 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_86 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_87 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_88 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_89 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_90 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_91 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_92 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_93 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_94 | 0.0 | 1.0 | 0.0 |
| IBEFILGH_95 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_96 | 1.0 | 0.0 | 1.0 |
| IBEFILGH_97 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IBEFILGH_4 | 129755 | 136134 | True | Unknown | VOG4552, |
| IBEFILGH_11 | 533129 | 545478 | False | Unknown | VOG0083, |
Phigaro v2.4.0 (Database: Jan. 2024 release)