Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KDCKMCJM_52 | 17335 | 19308 | tet(Q) | ARO:3000191 | tet(Q) | 97.11 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KDCKMCJM_52 | 17335 | 19260 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KDCKMCJM_52 | 17338 | 19260 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KDCKMCJM_1 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_2 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_4 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_5 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_6 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_7 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_8 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_9 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_10 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_11 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_12 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_13 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_14 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_15 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_16 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_17 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_18 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_19 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_20 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_21 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_22 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_23 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_24 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_25 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_26 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_27 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_28 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_29 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_30 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_31 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_32 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_33 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_34 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_35 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_36 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_37 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_38 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_39 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_40 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_41 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_42 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_43 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_44 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_45 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_46 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_47 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_48 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_49 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_50 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_51 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_52 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_53 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_54 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_55 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_56 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_57 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_58 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_59 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_60 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_61 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_62 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_63 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_64 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_65 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_66 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_67 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_68 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_69 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_70 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_71 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_72 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_73 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_75 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_76 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_78 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_79 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_80 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_81 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_82 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_83 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_84 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_85 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_86 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_87 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_89 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_90 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_91 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_92 | 0.0 | 1.0 | 0.0 |
| KDCKMCJM_93 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_94 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_95 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_96 | 1.0 | 0.0 | 1.0 |
| KDCKMCJM_97 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KDCKMCJM_11 | 129755 | 136134 | True | Unknown | VOG4552, |
| KDCKMCJM_15 | 18535 | 31939 | False | Unknown | VOG1198, |
Phigaro v2.4.0 (Database: Jan. 2024 release)