Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 8 | 0 | 0 | 8.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BKGEOKAE_97 | 183860 | 184594 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| BKGEOKAE_16 | 96102 | 98027 | tet(Q) | ARO:3000191 | tet(Q) | 96.10 | 97.56 | Z21523.1 |
| BKGEOKAE_10 | 58267 | 59232 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| BKGEOKAE_6 | 1205 | 3130 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| BKGEOKAE_45 | 1170 | 3095 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| BKGEOKAE_45 | 83 | 883 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BKGEOKAE_10 | 58267 | 59232 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| BKGEOKAE_6 | 1205 | 3130 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
| BKGEOKAE_45 | 83 | 883 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
| BKGEOKAE_97 | 183860 | 184594 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| BKGEOKAE_20 | 792 | 2255 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.54 | 100.00 | AF274302 |
| BKGEOKAE_20 | 2381 | 3595 | mef(A) | Erythromycin, Azithromycin | 94.24 | 99.75 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BKGEOKAE_10 | 58270 | 59232 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| BKGEOKAE_97 | 183863 | 184594 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| BKGEOKAE_6 | 1208 | 3130 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| BKGEOKAE_45 | 83 | 880 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| BKGEOKAE_16 | 96102 | 98024 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.75 | 100.00 | WP_063856409.1 |
| BKGEOKAE_20 | 795 | 2255 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 97.13 | 100.00 | WP_000420313.1 |
| BKGEOKAE_20 | 2372 | 3595 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 96.57 | 100.00 | WP_012102963.1 |
| BKGEOKAE_45 | 1170 | 3092 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BKGEOKAE_79 | 1709 | 2388 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BKGEOKAE_1 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_2 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_3 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_4 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_5 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_6 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_7 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_8 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_9 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_10 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_11 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_12 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_13 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_14 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_15 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_16 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_17 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_18 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_19 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_20 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_21 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_22 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_23 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_24 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_25 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_26 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_27 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_28 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_29 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_30 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_31 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_32 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_33 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_34 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_35 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_36 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_37 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_38 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_39 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_40 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_41 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_42 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_43 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_44 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_45 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_46 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_47 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_48 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_49 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_50 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_51 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_52 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_53 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_54 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_55 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_56 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_57 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_58 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_59 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_60 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_61 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_62 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_63 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_64 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_65 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_66 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_67 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_68 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_69 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_70 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_71 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_72 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_73 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_74 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_75 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_76 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_77 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_78 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_79 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_80 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_81 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_82 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_83 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_84 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_85 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_87 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_88 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_89 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_92 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_93 | 0.0 | 1.0 | 0.0 |
| BKGEOKAE_94 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_95 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_96 | 1.0 | 0.0 | 1.0 |
| BKGEOKAE_97 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BKGEOKAE_4 | 33075 | 37794 | False | Siphoviridae | VOG2703, |
Phigaro v2.4.0 (Database: Jan. 2024 release)