Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EIEHNIGI_33 | 30913 | 32887 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
| EIEHNIGI_13 | 481 | 1215 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EIEHNIGI_33 | 30913 | 32838 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
| EIEHNIGI_13 | 481 | 1215 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| EIEHNIGI_13 | 1987 | 3450 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.54 | 100.00 | AF274302 |
| EIEHNIGI_13 | 3576 | 4790 | mef(A) | Erythromycin, Azithromycin | 94.24 | 99.75 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EIEHNIGI_33 | 30916 | 32838 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
| EIEHNIGI_13 | 484 | 1215 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| EIEHNIGI_13 | 1990 | 3450 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 97.13 | 100.00 | WP_000420313.1 |
| EIEHNIGI_13 | 3567 | 4790 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 96.57 | 100.00 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EIEHNIGI_81 | 2019 | 2698 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EIEHNIGI_1 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_2 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_3 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_4 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_5 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_6 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_7 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_8 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_9 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_10 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_11 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_12 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_13 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_14 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_15 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_16 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_17 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_18 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_19 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_20 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_21 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_22 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_23 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_24 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_25 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_26 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_27 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_28 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_29 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_30 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_31 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_32 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_33 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_34 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_35 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_36 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_37 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_38 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_39 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_40 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_41 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_42 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_43 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_44 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_45 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_46 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_47 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_48 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_49 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_50 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_51 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_52 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_53 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_54 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_55 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_56 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_57 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_58 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_59 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_60 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_61 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_62 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_63 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_64 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_65 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_66 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_67 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_68 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_69 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_70 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_71 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_72 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_73 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_74 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_76 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_77 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_78 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_79 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_80 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_81 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_82 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_83 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_84 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_85 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_86 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_87 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_88 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_89 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_90 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_91 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_92 | 1.0 | 0.0 | 1.0 |
| EIEHNIGI_93 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_94 | 0.0 | 1.0 | 0.0 |
| EIEHNIGI_95 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EIEHNIGI_10 | 84107 | 97170 | False | Unknown | VOG4572, |
| EIEHNIGI_44 | 148527 | 159238 | False | Unknown | VOG5821, |
Phigaro v2.4.0 (Database: Jan. 2024 release)