Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KAOFBDMI_22 | 94696 | 96621 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KAOFBDMI_22 | 94696 | 96621 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| KAOFBDMI_45 | 198 | 952 | cfxA6 | Unknown Beta-lactam | 87.17 | 75.70 | GQ342996 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KAOFBDMI_22 | 94699 | 96621 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| KAOFBDMI_45 | 57 | 1001 | cfxA6 | broad-spectrum class A beta-lactamase CfxA6 | BLASTX | 80.00 | 98.44 | WP_117664257.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KAOFBDMI_38 | 857 | 1536 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KAOFBDMI_1 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_2 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_3 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_4 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_5 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_6 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_7 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_8 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_9 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_10 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_11 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_12 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_13 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_14 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_15 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_16 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_17 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_18 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_19 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_20 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_21 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_22 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_23 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_24 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_25 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_26 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_27 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_28 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_29 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_30 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_31 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_32 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_33 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_34 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_35 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_36 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_37 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_38 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_39 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_40 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_41 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_43 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_44 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_45 | 1.0 | 0.0 | 1.0 |
| KAOFBDMI_46 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_47 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_48 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_49 | 0.0 | 1.0 | 0.0 |
| KAOFBDMI_50 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KAOFBDMI_33 | 50912 | 62785 | False | Unknown | VOG5096, |
Phigaro v2.4.0 (Database: Jan. 2024 release)