Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| HMKKOCBM_45 | 541 | 773 | Col(BS512) | 233 / 233 | 100.00 | NC010656 |
| HMKKOCBM_35 | 1538 | 2217 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
| HMKKOCBM_37 | 275 | 536 | Col(MG828) | 262 / 262 | 93.51 | NC008486 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HMKKOCBM_1 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_2 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_3 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_4 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_5 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_6 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_7 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_8 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_9 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_10 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_11 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_12 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_13 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_14 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_15 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_16 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_17 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_18 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_19 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_20 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_21 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_22 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_23 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_24 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_25 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_26 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_27 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_28 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_29 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_30 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_31 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_32 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_33 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_34 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_35 | 1.0 | 0.0 | 1.0 |
| HMKKOCBM_37 | 1.0 | 0.0 | 1.0 |
| HMKKOCBM_38 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_39 | 1.0 | 0.0 | 1.0 |
| HMKKOCBM_40 | 1.0 | 0.0 | 1.0 |
| HMKKOCBM_42 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_44 | 1.0 | 0.0 | 1.0 |
| HMKKOCBM_45 | 1.0 | 0.0 | 1.0 |
| HMKKOCBM_46 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_47 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_48 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_49 | 0.0 | 1.0 | 0.0 |
| HMKKOCBM_50 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HMKKOCBM_11 | 544370 | 556607 | False | Unknown | VOG5096, |
Phigaro v2.4.0 (Database: Jan. 2024 release)