Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IGNKILOI_65 | 2892 | 4817 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| IGNKILOI_18 | 156 | 1121 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IGNKILOI_18 | 156 | 1121 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| IGNKILOI_65 | 2892 | 4817 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IGNKILOI_18 | 156 | 1118 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| IGNKILOI_65 | 2892 | 4814 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IGNKILOI_1 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_2 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_3 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_4 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_5 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_6 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_7 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_8 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_9 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_10 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_11 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_12 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_13 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_14 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_15 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_16 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_17 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_18 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_19 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_20 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_21 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_22 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_23 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_24 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_25 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_26 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_27 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_28 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_29 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_30 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_31 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_32 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_33 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_34 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_35 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_36 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_37 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_38 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_39 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_40 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_41 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_42 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_43 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_44 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_45 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_46 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_47 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_48 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_49 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_50 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_51 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_52 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_53 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_54 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_55 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_56 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_57 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_58 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_59 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_60 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_61 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_62 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_63 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_64 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_65 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_66 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_67 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_68 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_69 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_70 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_71 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_72 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_73 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_74 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_75 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_76 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_77 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_78 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_79 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_80 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_81 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_82 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_83 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_84 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_86 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_87 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_88 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_89 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_90 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_91 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_92 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_93 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_94 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_95 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_96 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_97 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_98 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_99 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_100 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_101 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_102 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_103 | 0.0 | 1.0 | 0.0 |
| IGNKILOI_104 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_105 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_106 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_108 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_109 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_110 | 1.0 | 0.0 | 1.0 |
| IGNKILOI_111 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IGNKILOI_78 | 151887 | 158535 | False | Siphoviridae | VOG0204, |
Phigaro v2.4.0 (Database: Jan. 2024 release)