Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JMPGDMOB_6 | 19606 | 21531 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| JMPGDMOB_4 | 139 | 2064 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JMPGDMOB_4 | 139 | 2064 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| JMPGDMOB_6 | 21818 | 22619 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.38 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JMPGDMOB_4 | 139 | 2061 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| JMPGDMOB_6 | 19609 | 21531 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
| JMPGDMOB_6 | 21821 | 22501 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | INTERNAL_STOP | 86.34 | 85.34 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JMPGDMOB_1 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_2 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_3 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_4 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_5 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_6 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_7 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_8 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_9 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_10 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_11 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_12 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_13 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_14 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_15 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_16 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_17 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_18 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_19 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_20 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_21 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_22 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_23 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_24 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_25 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_26 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_27 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_28 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_29 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_30 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_31 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_32 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_33 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_34 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_35 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_36 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_37 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_38 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_39 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_40 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_41 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_42 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_43 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_44 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_45 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_46 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_47 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_48 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_49 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_50 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_51 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_52 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_53 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_54 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_55 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_56 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_57 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_58 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_59 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_60 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_61 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_62 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_63 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_64 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_65 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_66 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_67 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_68 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_69 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_70 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_71 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_72 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_73 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_74 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_75 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_76 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_77 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_78 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_79 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_80 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_81 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_82 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_83 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_84 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_85 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_86 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_87 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_88 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_89 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_90 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_92 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_93 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_94 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_95 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_96 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_97 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_98 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_99 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_100 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_101 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_102 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_103 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_104 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_105 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_106 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_107 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_108 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_110 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_111 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_112 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_113 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_114 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_117 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_118 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_119 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_120 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_121 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_122 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_123 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_124 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_125 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_126 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_127 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_128 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_129 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_130 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_131 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_132 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_133 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_134 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_135 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_136 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_137 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_138 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_139 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_140 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_141 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_142 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_143 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_144 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_145 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_146 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_147 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_148 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_149 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_150 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_151 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_152 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_153 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_154 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_155 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_156 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_157 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_158 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_159 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_160 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_161 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_162 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_163 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_164 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_165 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_166 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_167 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_168 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_169 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_170 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_171 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_172 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_173 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_174 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_175 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_176 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_177 | 1.0 | 0.0 | 1.0 |
| JMPGDMOB_178 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_179 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_180 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_181 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_182 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_183 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_184 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_185 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_186 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_187 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_188 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_189 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_190 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_191 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_192 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_193 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_194 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_195 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_196 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_197 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_198 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_199 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_200 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_201 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_202 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_203 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_204 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_205 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_206 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_207 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_208 | 0.0 | 1.0 | 0.0 |
| JMPGDMOB_209 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JMPGDMOB_134 | 40165 | 51875 | False | Siphoviridae | VOG0749, |
Phigaro v2.4.0 (Database: Jan. 2024 release)