Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IILAPMFO_36 | 2380 | 2577 | CspR | 1.41e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| IILAPMFO_36 | 2380 | 2577 | CspA | 2.62e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IILAPMFO_3 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_4 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_5 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_6 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_7 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_8 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_9 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_10 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_11 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_12 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_13 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_14 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_15 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_16 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_17 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_18 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_19 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_20 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_21 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_22 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_23 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_24 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_25 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_26 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_27 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_28 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_29 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_30 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_31 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_32 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_33 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_34 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_35 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_36 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_37 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_38 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_39 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_40 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_41 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_42 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_43 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_44 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_45 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_46 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_47 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_48 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_49 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_50 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_51 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_52 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_53 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_54 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_55 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_56 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_57 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_58 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_59 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_60 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_61 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_62 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_63 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_64 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_65 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_66 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_67 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_68 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_69 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_70 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_71 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_72 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_73 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_74 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_76 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_77 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_78 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_79 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_80 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_82 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_83 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_84 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_85 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_86 | 1.0 | 0.0 | 1.0 |
| IILAPMFO_90 | 0.0 | 1.0 | 0.0 |
| IILAPMFO_101 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IILAPMFO_5 | 25003 | 38031 | False | Myoviridae | VOG0189, VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226 |
Phigaro v2.4.0 (Database: Jan. 2024 release)