Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 1 | 4.12 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OGGHEABL_125 | 118635 | 119840 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| OGGHEABL_81 | 8233 | 9198 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| OGGHEABL_84 | 2837 | 4762 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OGGHEABL_81 | 8233 | 9198 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| OGGHEABL_84 | 2837 | 4762 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OGGHEABL_81 | 8236 | 9198 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| OGGHEABL_125 | 119865 | 120374 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| OGGHEABL_84 | 2837 | 4759 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| OGGHEABL_125 | 118635 | 119837 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OGGHEABL_105 | 54523 | 56103 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OGGHEABL_1 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_2 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_3 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_4 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_5 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_6 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_8 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_9 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_11 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_12 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_13 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_14 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_16 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_18 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_19 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_21 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_23 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_24 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_26 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_27 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_28 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_29 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_30 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_31 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_32 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_33 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_35 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_36 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_37 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_38 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_39 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_42 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_46 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_47 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_49 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_51 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_53 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_55 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_56 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_57 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_58 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_59 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_60 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_61 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_62 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_63 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_64 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_65 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_66 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_67 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_68 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_69 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_71 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_72 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_73 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_74 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_75 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_76 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_77 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_78 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_79 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_81 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_82 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_83 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_84 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_85 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_86 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_87 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_88 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_90 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_93 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_94 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_97 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_99 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_100 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_101 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_102 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_103 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_104 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_105 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_106 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_107 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_108 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_110 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_112 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_113 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_114 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_115 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_116 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_118 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_119 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_120 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_121 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_122 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_123 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_124 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_125 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_126 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_127 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_128 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_130 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_131 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_132 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_133 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_134 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_135 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_136 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_137 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_138 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_139 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_140 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_141 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_142 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_143 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_144 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_145 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_146 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_147 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_148 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_149 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_150 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_151 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_152 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_153 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_154 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_155 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_156 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_157 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_158 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_159 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_161 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_162 | 1.0 | 0.0 | 1.0 |
| OGGHEABL_163 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_164 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_165 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_166 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_167 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_168 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_169 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_170 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_171 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_172 | 0.0 | 1.0 | 0.0 |
| OGGHEABL_173 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OGGHEABL_124 | 14992 | 27637 | False | Unknown | VOG7483, |
| OGGHEABL_167 | 17634 | 21212 | False | Myoviridae | VOG10904, |
Phigaro v2.4.0 (Database: Jan. 2024 release)