Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CACAEFIG_136 | 24050 | 23346 | WalR | 6.13e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| CACAEFIG_78 | 20563 | 20760 | CspR | 5.24e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CACAEFIG_1 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_2 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_3 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_4 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_5 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_6 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_7 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_8 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_9 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_11 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_12 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_13 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_14 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_15 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_16 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_17 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_18 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_21 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_32 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_40 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_44 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_46 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_49 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_53 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_59 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_65 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_66 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_71 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_72 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_73 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_74 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_75 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_76 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_77 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_78 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_79 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_80 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_81 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_82 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_83 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_84 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_85 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_86 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_87 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_88 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_89 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_90 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_91 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_92 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_93 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_94 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_95 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_96 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_97 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_98 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_99 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_100 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_101 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_102 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_103 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_104 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_105 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_106 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_107 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_108 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_109 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_110 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_111 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_112 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_113 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_114 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_115 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_116 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_117 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_118 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_119 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_120 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_121 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_122 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_123 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_124 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_125 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_126 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_127 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_128 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_129 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_130 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_131 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_132 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_133 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_134 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_135 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_136 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_137 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_138 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_140 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_141 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_142 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_143 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_144 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_145 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_146 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_147 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_148 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_149 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_150 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_152 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_153 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_154 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_155 | 0.0 | 1.0 | 0.0 |
| CACAEFIG_156 | 1.0 | 0.0 | 1.0 |
| CACAEFIG_157 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CACAEFIG_84 | 2573 | 27137 | False | Siphoviridae | VOG8294, VOG0703, VOG0753, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG0209, VOG4586, VOG0207, VOG0205, VOG4568, VOG4556, VOG0202, VOG1886, VOG4581, VOG0195 |
Phigaro v2.4.0 (Database: Jan. 2024 release)