Probiotic potential risk score


ARGs VFs PGs PPRS
0022.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
KCNCEGPA_31113734113030WalR1.81e-112transcriptional regulatory protein83.40100.00EPH95667
KCNCEGPA_1061397914176CspR1.55e-33cold shock protein89.39100.00AAO82613

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
KCNCEGPA_70.01.00.0
KCNCEGPA_100.01.00.0
KCNCEGPA_110.01.00.0
KCNCEGPA_130.01.00.0
KCNCEGPA_140.01.00.0
KCNCEGPA_180.01.00.0
KCNCEGPA_220.01.00.0
KCNCEGPA_280.01.00.0
KCNCEGPA_290.01.00.0
KCNCEGPA_300.01.00.0
KCNCEGPA_310.01.00.0
KCNCEGPA_320.01.00.0
KCNCEGPA_330.01.00.0
KCNCEGPA_340.01.00.0
KCNCEGPA_351.00.01.0
KCNCEGPA_360.01.00.0
KCNCEGPA_370.01.00.0
KCNCEGPA_380.01.00.0
KCNCEGPA_390.01.00.0
KCNCEGPA_400.01.00.0
KCNCEGPA_411.00.01.0
KCNCEGPA_420.01.00.0
KCNCEGPA_430.01.00.0
KCNCEGPA_441.00.01.0
KCNCEGPA_451.00.01.0
KCNCEGPA_460.01.00.0
KCNCEGPA_470.01.00.0
KCNCEGPA_480.01.00.0
KCNCEGPA_491.00.01.0
KCNCEGPA_500.01.00.0
KCNCEGPA_510.01.00.0
KCNCEGPA_521.00.01.0
KCNCEGPA_530.01.00.0
KCNCEGPA_540.01.00.0
KCNCEGPA_551.00.01.0
KCNCEGPA_560.01.00.0
KCNCEGPA_570.01.00.0
KCNCEGPA_580.01.00.0
KCNCEGPA_590.01.00.0
KCNCEGPA_600.01.00.0
KCNCEGPA_611.00.01.0
KCNCEGPA_620.01.00.0
KCNCEGPA_630.01.00.0
KCNCEGPA_640.01.00.0
KCNCEGPA_651.00.01.0
KCNCEGPA_660.01.00.0
KCNCEGPA_671.00.01.0
KCNCEGPA_681.00.01.0
KCNCEGPA_690.01.00.0
KCNCEGPA_701.00.01.0
KCNCEGPA_711.00.01.0
KCNCEGPA_721.00.01.0
KCNCEGPA_731.00.01.0
KCNCEGPA_740.01.00.0
KCNCEGPA_750.01.00.0
KCNCEGPA_760.01.00.0
KCNCEGPA_771.00.01.0
KCNCEGPA_781.00.01.0
KCNCEGPA_790.01.00.0
KCNCEGPA_811.00.01.0
KCNCEGPA_821.00.01.0
KCNCEGPA_831.00.01.0
KCNCEGPA_841.00.01.0
KCNCEGPA_850.01.00.0
KCNCEGPA_861.00.01.0
KCNCEGPA_871.00.01.0
KCNCEGPA_881.00.01.0
KCNCEGPA_891.00.01.0
KCNCEGPA_901.00.01.0
KCNCEGPA_910.01.00.0
KCNCEGPA_921.00.01.0
KCNCEGPA_931.00.01.0
KCNCEGPA_941.00.01.0
KCNCEGPA_950.01.00.0
KCNCEGPA_960.01.00.0
KCNCEGPA_971.00.01.0
KCNCEGPA_981.00.01.0
KCNCEGPA_991.00.01.0
KCNCEGPA_1011.00.01.0
KCNCEGPA_1060.01.00.0
KCNCEGPA_1170.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
No hit found

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements