Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JEGFKIBI_1 | 306056 | 305352 | WalR | 2.64e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| JEGFKIBI_31 | 6199 | 6002 | CspR | 1.41e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JEGFKIBI_20 | 10268 | 11329 | repUS74 | 1063 / 1062 | 93.79 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JEGFKIBI_1 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_2 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_3 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_4 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_5 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_6 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_7 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_8 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_9 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_10 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_11 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_12 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_13 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_14 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_15 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_16 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_17 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_18 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_19 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_20 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_21 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_22 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_23 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_24 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_25 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_26 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_27 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_28 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_29 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_30 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_31 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_32 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_33 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_34 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_35 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_36 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_37 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_38 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_39 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_40 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_41 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_42 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_43 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_44 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_45 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_46 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_47 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_49 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_50 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_51 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_52 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_53 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_54 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_55 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_56 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_57 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_58 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_59 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_60 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_61 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_62 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_63 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_64 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_65 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_66 | 1.0 | 0.0 | 1.0 |
| JEGFKIBI_67 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_78 | 0.0 | 1.0 | 0.0 |
| JEGFKIBI_89 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JEGFKIBI_5 | 39236 | 71615 | False | Siphoviridae | VOG4649, VOG0703, VOG0054, VOG1637, VOG0648, VOG3498, VOG4763, VOG4633, VOG4545, VOG1898, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG0519, VOG4841, VOG4673, VOG0744, VOG4693, VOG0044, VOG6495, VOG0189, VOG4566, VOG11003, VOG1309, VOG4600, VOG10867, VOG4552, VOG5353, VOG6495, VOG4602 |
| JEGFKIBI_7 | 64512 | 74108 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4609, VOG4632, VOG1581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)