Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DOCDMDCL_1 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_2 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_3 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_6 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_7 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_8 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_10 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_11 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_12 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_13 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_14 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_16 | 1.0 | 0.0 | 1.0 |
| DOCDMDCL_17 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_18 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_19 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_21 | 1.0 | 0.0 | 1.0 |
| DOCDMDCL_22 | 1.0 | 0.0 | 1.0 |
| DOCDMDCL_24 | 1.0 | 0.0 | 1.0 |
| DOCDMDCL_27 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_37 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_44 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_45 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_52 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_57 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_61 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_64 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_71 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_76 | 1.0 | 0.0 | 1.0 |
| DOCDMDCL_83 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_92 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_94 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_96 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_102 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_103 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_109 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_113 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_119 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_155 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_167 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_215 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_216 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_218 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_220 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_221 | 1.0 | 0.0 | 1.0 |
| DOCDMDCL_223 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_224 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_227 | 1.0 | 0.0 | 1.0 |
| DOCDMDCL_228 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_229 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_232 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_233 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_235 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_236 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_237 | 0.0 | 1.0 | 0.0 |
| DOCDMDCL_238 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DOCDMDCL_6 | 82278 | 93852 | False | Myoviridae | VOG4609, |
Phigaro v2.4.0 (Database: Jan. 2024 release)