Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NPAIPLAM_89 | 1054 | 1251 | CspA | 2.17e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| NPAIPLAM_89 | 1054 | 1248 | CspR | 9.40e-29 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NPAIPLAM_1 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_2 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_3 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_4 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_5 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_6 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_7 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_8 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_9 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_10 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_11 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_12 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_13 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_14 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_15 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_16 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_18 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_19 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_20 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_21 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_22 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_23 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_24 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_25 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_26 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_27 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_28 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_30 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_33 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_44 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_47 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_48 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_49 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_50 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_51 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_52 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_53 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_54 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_55 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_56 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_57 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_58 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_59 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_60 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_61 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_62 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_63 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_64 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_65 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_66 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_67 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_68 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_69 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_70 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_71 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_72 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_73 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_74 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_75 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_76 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_77 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_78 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_79 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_80 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_81 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_82 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_83 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_84 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_85 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_86 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_87 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_88 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_89 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_90 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_91 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_92 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_93 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_94 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_95 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_96 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_97 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_98 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_99 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_100 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_101 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_102 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_103 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_104 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_105 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_106 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_107 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_108 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_109 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_110 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_111 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_112 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_113 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_114 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_115 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_116 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_117 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_118 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_119 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_120 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_121 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_122 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_123 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_124 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_125 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_126 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_127 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_128 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_129 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_130 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_131 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_132 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_133 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_134 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_135 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_136 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_137 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_138 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_139 | 0.0 | 1.0 | 0.0 |
| NPAIPLAM_140 | 1.0 | 0.0 | 1.0 |
| NPAIPLAM_141 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NPAIPLAM_119 | 13404 | 34540 | False | Myoviridae | VOG10457, VOG8295, VOG0025, VOG6431, VOG6085, VOG0226, VOG0205, VOG0384, VOG0382, VOG0083, VOG5235, VOG0189, VOG3738 |
Phigaro v2.4.0 (Database: Jan. 2024 release)