Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JKFGDJHN_117 | 1230 | 1427 | CspA | 2.23e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| JKFGDJHN_117 | 1230 | 1424 | CspR | 9.67e-29 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JKFGDJHN_1 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_2 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_3 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_4 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_5 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_6 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_8 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_9 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_10 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_11 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_12 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_14 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_15 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_16 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_17 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_18 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_19 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_20 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_21 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_22 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_23 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_24 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_26 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_27 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_28 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_29 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_30 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_31 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_32 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_33 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_34 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_35 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_36 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_37 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_38 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_39 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_40 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_41 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_42 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_44 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_55 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_66 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_77 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_82 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_83 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_84 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_85 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_86 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_87 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_88 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_89 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_90 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_91 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_92 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_93 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_94 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_95 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_96 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_97 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_98 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_99 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_100 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_101 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_102 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_103 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_104 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_105 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_106 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_107 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_108 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_109 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_110 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_111 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_112 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_113 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_114 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_115 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_116 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_117 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_118 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_119 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_120 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_121 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_122 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_123 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_124 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_125 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_126 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_127 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_128 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_129 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_130 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_131 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_132 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_133 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_134 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_135 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_136 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_137 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_138 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_139 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_140 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_141 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_142 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_143 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_144 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_145 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_146 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_147 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_148 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_149 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_150 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_151 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_152 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_153 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_154 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_155 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_156 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_157 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_158 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_159 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_160 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_161 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_162 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_163 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_164 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_165 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_166 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_167 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_168 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_169 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_170 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_171 | 0.0 | 1.0 | 0.0 |
| JKFGDJHN_172 | 1.0 | 0.0 | 1.0 |
| JKFGDJHN_173 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JKFGDJHN_22 | 6244 | 24660 | False | Myoviridae | VOG3738, VOG0189, VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085, VOG6431, VOG0025, VOG8295 |
Phigaro v2.4.0 (Database: Jan. 2024 release)