Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 3 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MOBNJGLB_124 | 58351 | 57644 | WalR | 3.21e-116 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| MOBNJGLB_140 | 261 | 521 | metJ | 1.75e-60 | regulatory protein | 100.00 | 82.86 | AAA24163 |
| MOBNJGLB_113 | 95007 | 94810 | CspR | 4.49e-28 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| MOBNJGLB_113 | 95007 | 94813 | CspA | 2.19e-27 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MOBNJGLB_11 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_22 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_33 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_44 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_55 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_66 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_77 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_88 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_90 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_91 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_92 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_93 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_94 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_95 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_96 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_97 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_98 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_100 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_102 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_104 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_105 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_106 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_107 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_113 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_124 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_134 | 1.0 | 0.0 | 1.0 |
| MOBNJGLB_145 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_156 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_167 | 0.0 | 1.0 | 0.0 |
| MOBNJGLB_178 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MOBNJGLB_102 | 79615 | 108105 | False | Siphoviridae | VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG0198, VOG0996, VOG1738, VOG4857, VOG0796, VOG10227, VOG0720, VOG4564, VOG10914, VOG4572, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4633, VOG5904, VOG5008, VOG0641 |
| MOBNJGLB_102 | 242135 | 260786 | False | Siphoviridae | VOG8681, VOG0638, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG9583, VOG0207, VOG4586, VOG4545, VOG0801, VOG3462 |
Phigaro v2.4.0 (Database: Jan. 2024 release)