Probiotic potential risk score


ARGs VFs PGs PPRS
0022.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DABFFLPJ_3118072118776WalR6.99e-115transcriptional regulatory protein84.25100.00EPH95667
DABFFLPJ_44106915107109CspR8.57e-30cold shock protein84.6198.48AAO82613
DABFFLPJ_44106915107112CspA1.31e-29cold shock protein84.85100.00CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
DABFFLPJ_351251078repUS64954 / 95499.37JN601038
DABFFLPJ_1822883322rep381045 / 110481.53CP002655

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
DABFFLPJ_10.01.00.0
DABFFLPJ_20.01.00.0
DABFFLPJ_30.01.00.0
DABFFLPJ_40.01.00.0
DABFFLPJ_50.01.00.0
DABFFLPJ_60.01.00.0
DABFFLPJ_70.01.00.0
DABFFLPJ_80.01.00.0
DABFFLPJ_90.01.00.0
DABFFLPJ_100.01.00.0
DABFFLPJ_110.01.00.0
DABFFLPJ_120.01.00.0
DABFFLPJ_131.00.01.0
DABFFLPJ_141.00.01.0
DABFFLPJ_150.01.00.0
DABFFLPJ_161.00.01.0
DABFFLPJ_170.01.00.0
DABFFLPJ_181.00.01.0
DABFFLPJ_190.01.00.0
DABFFLPJ_201.00.01.0
DABFFLPJ_211.00.01.0
DABFFLPJ_220.01.00.0
DABFFLPJ_231.00.01.0
DABFFLPJ_241.00.01.0
DABFFLPJ_251.00.01.0
DABFFLPJ_261.00.01.0
DABFFLPJ_271.00.01.0
DABFFLPJ_280.01.00.0
DABFFLPJ_291.00.01.0
DABFFLPJ_300.01.00.0
DABFFLPJ_310.01.00.0
DABFFLPJ_330.01.00.0
DABFFLPJ_341.00.01.0
DABFFLPJ_351.00.01.0
DABFFLPJ_361.00.01.0
DABFFLPJ_381.00.01.0
DABFFLPJ_391.00.01.0
DABFFLPJ_401.00.01.0
DABFFLPJ_410.01.00.0
DABFFLPJ_421.00.01.0
DABFFLPJ_431.00.01.0
DABFFLPJ_440.01.00.0
DABFFLPJ_510.01.00.0
DABFFLPJ_520.01.00.0
DABFFLPJ_530.01.00.0
DABFFLPJ_540.01.00.0
DABFFLPJ_550.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
DABFFLPJ_7416237389FalseSiphoviridaeVOG9667, VOG6139, VOG8615, VOG3549, VOG0650, VOG0535, VOG0283, VOG0226, VOG4566, VOG4552, VOG4693, VOG0044, VOG0198, VOG3699, VOG0691, VOG0692, VOG9317, VOG4711, VOG0695, VOG0696, VOG0697, VOG6548, VOG9763, VOG0701, VOG6163, VOG0801, VOG4619, VOG8438, VOG0870, VOG0804, VOG4705, VOG8294
DABFFLPJ_33149932158516FalseSiphoviridaeVOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0205
DABFFLPJ_51146273150947FalseUnknownVOG4675, VOG9667, VOG3699, VOG4552, VOG4565, VOG7169
DABFFLPJ_525498677051FalseSiphoviridaeVOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0660, VOG4605, VOG4599

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements