Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OBALODAO_45 | 74270 | 75172 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
| OBALODAO_13 | 44820 | 46766 | tet(Q) | ARO:3000191 | tet(Q) | 97.81 | 98.63 | Z21523.1 |
| OBALODAO_19 | 27596 | 28462 | ErmF | ARO:3000498 | ErmF | 98.50 | 108.27 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OBALODAO_45 | 74270 | 75172 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | FR688022 |
| OBALODAO_19 | 27596 | 28396 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
| OBALODAO_13 | 44820 | 46732 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.75 | 99.33 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OBALODAO_45 | 74273 | 75172 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005816369.1 |
| OBALODAO_19 | 27599 | 28396 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| OBALODAO_13 | 44820 | 46733 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.96 | 99.53 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OBALODAO_1 | 0.0 | 1.0 | 0.0 |
| OBALODAO_2 | 0.0 | 1.0 | 0.0 |
| OBALODAO_3 | 0.0 | 1.0 | 0.0 |
| OBALODAO_4 | 0.0 | 1.0 | 0.0 |
| OBALODAO_5 | 0.0 | 1.0 | 0.0 |
| OBALODAO_6 | 0.0 | 1.0 | 0.0 |
| OBALODAO_7 | 0.0 | 1.0 | 0.0 |
| OBALODAO_8 | 0.0 | 1.0 | 0.0 |
| OBALODAO_9 | 0.0 | 1.0 | 0.0 |
| OBALODAO_10 | 0.0 | 1.0 | 0.0 |
| OBALODAO_11 | 0.0 | 1.0 | 0.0 |
| OBALODAO_12 | 0.0 | 1.0 | 0.0 |
| OBALODAO_13 | 0.0 | 1.0 | 0.0 |
| OBALODAO_14 | 0.0 | 1.0 | 0.0 |
| OBALODAO_15 | 0.0 | 1.0 | 0.0 |
| OBALODAO_16 | 0.0 | 1.0 | 0.0 |
| OBALODAO_17 | 0.0 | 1.0 | 0.0 |
| OBALODAO_18 | 1.0 | 0.0 | 1.0 |
| OBALODAO_19 | 0.0 | 1.0 | 0.0 |
| OBALODAO_20 | 0.0 | 1.0 | 0.0 |
| OBALODAO_21 | 0.0 | 1.0 | 0.0 |
| OBALODAO_22 | 0.0 | 1.0 | 0.0 |
| OBALODAO_23 | 0.0 | 1.0 | 0.0 |
| OBALODAO_24 | 0.0 | 1.0 | 0.0 |
| OBALODAO_25 | 1.0 | 0.0 | 1.0 |
| OBALODAO_26 | 0.0 | 1.0 | 0.0 |
| OBALODAO_27 | 1.0 | 0.0 | 1.0 |
| OBALODAO_28 | 0.0 | 1.0 | 0.0 |
| OBALODAO_29 | 1.0 | 0.0 | 1.0 |
| OBALODAO_30 | 0.0 | 1.0 | 0.0 |
| OBALODAO_31 | 1.0 | 0.0 | 1.0 |
| OBALODAO_32 | 0.0 | 1.0 | 0.0 |
| OBALODAO_34 | 0.0 | 1.0 | 0.0 |
| OBALODAO_35 | 0.0 | 1.0 | 0.0 |
| OBALODAO_36 | 0.0 | 1.0 | 0.0 |
| OBALODAO_37 | 1.0 | 0.0 | 1.0 |
| OBALODAO_38 | 1.0 | 0.0 | 1.0 |
| OBALODAO_39 | 0.0 | 1.0 | 0.0 |
| OBALODAO_40 | 0.0 | 1.0 | 0.0 |
| OBALODAO_41 | 1.0 | 0.0 | 1.0 |
| OBALODAO_42 | 1.0 | 0.0 | 1.0 |
| OBALODAO_43 | 1.0 | 0.0 | 1.0 |
| OBALODAO_44 | 1.0 | 0.0 | 1.0 |
| OBALODAO_45 | 0.0 | 1.0 | 0.0 |
| OBALODAO_46 | 1.0 | 0.0 | 1.0 |
| OBALODAO_47 | 1.0 | 0.0 | 1.0 |
| OBALODAO_48 | 0.0 | 1.0 | 0.0 |
| OBALODAO_49 | 0.0 | 1.0 | 0.0 |
| OBALODAO_50 | 1.0 | 0.0 | 1.0 |
| OBALODAO_56 | 0.0 | 1.0 | 0.0 |
| OBALODAO_66 | 0.0 | 1.0 | 0.0 |
| OBALODAO_67 | 0.0 | 1.0 | 0.0 |
| OBALODAO_68 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)