Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DGNBJHEL_45 | 131863 | 133788 | tet(Q) | ARO:3000191 | tet(Q) | 96.10 | 97.56 | Z21523.1 |
| DGNBJHEL_14 | 51560 | 52462 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| DGNBJHEL_67 | 340 | 1545 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DGNBJHEL_14 | 51560 | 52462 | cepA | Unknown Beta-lactam | 99.56 | 100.00 | FR688022 |
| DGNBJHEL_45 | 131863 | 133788 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 96.83 | 100.00 | X58717 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DGNBJHEL_14 | 51563 | 52462 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| DGNBJHEL_67 | 1570 | 2079 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| DGNBJHEL_67 | 340 | 1542 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| DGNBJHEL_45 | 131863 | 133785 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.75 | 100.00 | WP_063856409.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DGNBJHEL_1 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_2 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_3 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_4 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_5 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_6 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_7 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_8 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_9 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_10 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_11 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_12 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_13 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_14 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_15 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_16 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_17 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_18 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_19 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_20 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_21 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_22 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_23 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_24 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_25 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_26 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_27 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_28 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_29 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_30 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_31 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_32 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_33 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_34 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_35 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_36 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_37 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_38 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_39 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_40 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_41 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_43 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_44 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_45 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_46 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_47 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_48 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_49 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_50 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_51 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_52 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_53 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_54 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_55 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_56 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_57 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_58 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_59 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_60 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_61 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_62 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_63 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_64 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_65 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_66 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_67 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_68 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_69 | 1.0 | 0.0 | 1.0 |
| DGNBJHEL_78 | 0.0 | 1.0 | 0.0 |
| DGNBJHEL_89 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)