Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 0 | 6.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EMNKJMLN_119 | 138896 | 139798 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| EMNKJMLN_112 | 8866 | 9774 | aad(6) | ARO:3002628 | aad(6) | 100.00 | 109.42 | AY712687.1 |
| EMNKJMLN_112 | 8327 | 8869 | SAT-4 | ARO:3002897 | SAT-4 | 99.44 | 100.00 | U01945.1 |
| EMNKJMLN_112 | 6181 | 6975 | APH(3')-IIIa | ARO:3002647 | APH(3')-IIIa | 100.00 | 100.00 | CP004067.1 |
| EMNKJMLN_88 | 1094 | 1894 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EMNKJMLN_112 | 8866 | 9774 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | AF330699 |
| EMNKJMLN_112 | 6181 | 6975 | aph(3')-III | Kanamycin, Amikacin, Neomycin, Butirosin, Isepamicin, Lividomycin, Paromomycin, Ribostamycin | 100.00 | 100.00 | M26832 |
| EMNKJMLN_119 | 138896 | 139798 | cepA | Unknown Beta-lactam | 99.67 | 100.00 | L13472 |
| EMNKJMLN_88 | 1094 | 1894 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
| EMNKJMLN_113 | 8641 | 9858 | mef(A) | Erythromycin, Azithromycin | 95.16 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EMNKJMLN_112 | 8869 | 9774 | ant(6)-Ia | aminoglycoside nucleotidyltransferase ANT(6)-Ia | EXACTX | 100.00 | 100.00 | WP_001255866.1 |
| EMNKJMLN_112 | 6184 | 6975 | aph(3')-IIIa | aminoglycoside O-phosphotransferase APH(3')-IIIa | EXACTX | 100.00 | 100.00 | WP_001096887.1 |
| EMNKJMLN_119 | 138896 | 139795 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| EMNKJMLN_112 | 8330 | 8869 | sat4 | streptothricin N-acetyltransferase Sat4 | EXACTX | 100.00 | 100.00 | WP_000627290.1 |
| EMNKJMLN_88 | 1097 | 1894 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| EMNKJMLN_113 | 8641 | 9855 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 98.77 | 99.26 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EMNKJMLN_1 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_2 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_3 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_4 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_5 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_6 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_7 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_8 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_9 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_10 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_13 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_24 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_35 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_46 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_57 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_68 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_72 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_73 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_74 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_75 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_76 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_77 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_78 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_79 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_80 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_81 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_82 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_83 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_84 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_85 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_86 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_87 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_88 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_89 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_90 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_91 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_92 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_93 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_94 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_95 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_96 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_97 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_98 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_99 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_100 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_101 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_102 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_103 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_104 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_105 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_106 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_107 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_108 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_109 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_110 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_111 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_112 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_113 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_114 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_115 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_116 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_117 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_118 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_119 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_120 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_121 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_122 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_123 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_124 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_125 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_126 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_127 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_128 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_129 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_130 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_131 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_132 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_133 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_134 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_135 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_136 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_137 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_138 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_139 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_140 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_141 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_142 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_143 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_144 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_145 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_146 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_147 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_148 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_149 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_150 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_151 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_152 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_153 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_154 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_155 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_156 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_157 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_158 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_159 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_160 | 0.0 | 1.0 | 0.0 |
| EMNKJMLN_161 | 1.0 | 0.0 | 1.0 |
| EMNKJMLN_162 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)