Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OAOCFKDN_18 | 57615 | 59589 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
| OAOCFKDN_11 | 40513 | 41415 | CepA-44 | ARO:3006225 | CepA-44 | 99.33 | 100.00 | NG_050386.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OAOCFKDN_18 | 57615 | 59540 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
| OAOCFKDN_11 | 40513 | 41415 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | U05887 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OAOCFKDN_18 | 57618 | 59540 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
| OAOCFKDN_11 | 40516 | 41415 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005816369.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OAOCFKDN_1 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_2 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_3 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_4 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_5 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_6 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_7 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_8 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_9 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_10 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_11 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_12 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_13 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_14 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_15 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_16 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_17 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_18 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_19 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_20 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_21 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_22 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_23 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_24 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_25 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_26 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_27 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_28 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_29 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_30 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_31 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_32 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_33 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_34 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_35 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_36 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_37 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_38 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_39 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_40 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_41 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_42 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_43 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_44 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_45 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_46 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_47 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_48 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_49 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_50 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_51 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_52 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_53 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_54 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_55 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_56 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_57 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_58 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_59 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_60 | 1.0 | 0.0 | 1.0 |
| OAOCFKDN_67 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_78 | 0.0 | 1.0 | 0.0 |
| OAOCFKDN_88 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OAOCFKDN_23 | 143744 | 157956 | False | Siphoviridae | VOG4841, |
Phigaro v2.4.0 (Database: Jan. 2024 release)