Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BBFILJLJ_1 | 151191 | 151895 | WalR | 4.27e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| BBFILJLJ_15 | 33362 | 33165 | CspR | 2.80e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BBFILJLJ_25 | 13853 | 14911 | repUS75 | 1059 / 1059 | 100.00 | CP002393 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BBFILJLJ_1 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_2 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_3 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_4 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_5 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_6 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_7 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_8 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_9 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_10 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_11 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_12 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_13 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_14 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_15 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_16 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_17 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_18 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_19 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_20 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_21 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_22 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_23 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_24 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_25 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_26 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_27 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_28 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_29 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_30 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_31 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_32 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_34 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_35 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_36 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_37 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_38 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_39 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_40 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_41 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_42 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_43 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_44 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_45 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_46 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_47 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_48 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_49 | 1.0 | 0.0 | 1.0 |
| BBFILJLJ_55 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_60 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_61 | 0.0 | 1.0 | 0.0 |
| BBFILJLJ_62 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BBFILJLJ_1 | 70060 | 80682 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609 |
| BBFILJLJ_12 | 2200 | 23317 | False | Siphoviridae | VOG0796, VOG4544, VOG0720, VOG4564, VOG5616, VOG4555, VOG3434, VOG1887, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG7888, VOG0054, VOG4649 |
| BBFILJLJ_15 | 2417 | 11997 | False | Siphoviridae | VOG2820, VOG4643, VOG0275, VOG0195, VOG0536, VOG9860, VOG9667, VOG11003, VOG0226, VOG4566, VOG0186, VOG1309, VOG8241 |
Phigaro v2.4.0 (Database: Jan. 2024 release)