Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 1 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IMHDLIOH_245 | 150 | 293 | virulence_ecoli | colE4 | Colicin E4 | 97.92 | 100.00 | X63621 |
| IMHDLIOH_245 | 150 | 293 | virulence_ecoli | colE7 | Colicin E7 | 97.92 | 100.00 | M57540 |
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IMHDLIOH_25 | 753 | 985 | Col(BS512) | 233 / 233 | 100.00 | NC010656 |
| IMHDLIOH_31 | 530 | 683 | Col156 | 154 / 154 | 97.40 | NC009781 |
| IMHDLIOH_40 | 530 | 791 | Col(MG828) | 262 / 262 | 93.13 | NC008486 |
| IMHDLIOH_71 | 509 | 710 | Col8282 | 202 / 207 | 89.60 | DQ995352 |
| IMHDLIOH_62 | 472 | 582 | Col440I | 111 / 114 | 82.88 | CP023920.1 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IMHDLIOH_1 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_2 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_3 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_4 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_5 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_6 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_7 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_8 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_9 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_10 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_11 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_12 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_13 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_14 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_15 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_16 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_17 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_18 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_19 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_20 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_21 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_22 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_23 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_24 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_25 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_26 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_27 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_28 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_29 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_30 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_31 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_32 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_33 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_34 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_35 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_37 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_38 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_39 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_40 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_42 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_43 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_44 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_45 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_46 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_47 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_48 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_50 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_51 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_52 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_53 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_54 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_55 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_56 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_57 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_58 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_59 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_60 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_61 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_64 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_65 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_66 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_77 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_87 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_98 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_109 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_110 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_121 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_132 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_142 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_153 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_164 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_175 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_186 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_197 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_208 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_219 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_220 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_231 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_242 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_253 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_264 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_275 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_286 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_297 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_308 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_319 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_330 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_331 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_342 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_353 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_364 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_375 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_386 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_397 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_408 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_419 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_430 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_441 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_442 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_453 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_464 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_475 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_486 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_497 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_508 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_519 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_530 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_541 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_552 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_553 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_564 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_575 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_586 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_597 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_608 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_619 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_627 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_628 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_629 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_630 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_631 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_632 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_633 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_634 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_635 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_636 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_637 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_638 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_639 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_640 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_641 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_642 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_643 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_644 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_645 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_646 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_647 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_648 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_649 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_650 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_651 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_652 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_653 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_654 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_655 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_656 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_657 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_658 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_659 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_660 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_661 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_662 | 1.0 | 0.0 | 1.0 |
| IMHDLIOH_663 | 0.0 | 1.0 | 0.0 |
| IMHDLIOH_664 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IMHDLIOH_33 | 4413 | 32808 | False | Myoviridae | VOG5913, VOG0173, VOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG8263, VOG4699, VOG1352, VOG1883, VOG1353, VOG4710, VOG1942, VOG1915, VOG5027, VOG1912, VOG7407 |
| IMHDLIOH_110 | 5459 | 31179 | False | Myoviridae | VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376 |
| IMHDLIOH_442 | 17539 | 45276 | False | Siphoviridae | VOG4705, VOG4904, VOG6540, VOG4687, VOG0083, VOG7017, VOG4659, VOG4633, VOG3179, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG5051, VOG1886, VOG4581, VOG1648, VOG4841, VOG0198, VOG6005, VOG1698, VOG1446 |
Phigaro v2.4.0 (Database: Jan. 2024 release)