Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LBMAFHDG_192 | 268 | 14 | MliC | 7.36e-62 | lysozyme inhibitor | 100.00 | 79.44 | ADT75274 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| LBMAFHDG_17 | 1116 | 1373 | Col(MG828) | 258 / 262 | 94.19 | NC008486 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LBMAFHDG_1 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_2 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_3 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_4 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_5 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_6 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_7 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_8 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_9 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_10 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_11 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_12 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_13 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_14 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_16 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_17 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_18 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_19 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_21 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_22 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_23 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_24 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_25 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_26 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_27 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_28 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_29 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_31 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_32 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_33 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_34 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_35 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_36 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_44 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_54 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_65 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_76 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_87 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_98 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_109 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_110 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_120 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_131 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_142 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_153 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_164 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_175 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_186 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_197 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_208 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_219 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_220 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_231 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_242 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_252 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_263 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_274 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_285 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_296 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_307 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_318 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_329 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_330 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_341 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_352 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_363 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_372 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_373 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_374 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_375 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_376 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_377 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_378 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_379 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_380 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_381 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_382 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_383 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_384 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_385 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_386 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_387 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_388 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_389 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_390 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_391 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_392 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_393 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_394 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_395 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_396 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_397 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_398 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_399 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_400 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_401 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_402 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_403 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_404 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_405 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_406 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_407 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_408 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_409 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_410 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_411 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_412 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_413 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_414 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_415 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_416 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_417 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_418 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_419 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_420 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_421 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_422 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_423 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_424 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_425 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_426 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_427 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_428 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_429 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_430 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_431 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_432 | 0.0 | 1.0 | 0.0 |
| LBMAFHDG_433 | 1.0 | 0.0 | 1.0 |
| LBMAFHDG_434 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)