Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| APOLPBKG_1 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_2 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_3 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_4 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_5 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_6 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_7 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_8 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_9 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_10 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_11 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_12 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_13 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_14 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_15 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_16 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_17 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_18 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_19 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_20 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_21 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_22 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_23 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_24 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_25 | 1.0 | 0.0 | 1.0 |
| APOLPBKG_26 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_27 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_28 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_29 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_30 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_31 | 1.0 | 0.0 | 1.0 |
| APOLPBKG_32 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_33 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_34 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_35 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_36 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_37 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_38 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_39 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_40 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_41 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_42 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_43 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_44 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_45 | 1.0 | 0.0 | 1.0 |
| APOLPBKG_46 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_48 | 1.0 | 0.0 | 1.0 |
| APOLPBKG_49 | 1.0 | 0.0 | 1.0 |
| APOLPBKG_50 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_51 | 1.0 | 0.0 | 1.0 |
| APOLPBKG_52 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_55 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_56 | 1.0 | 0.0 | 1.0 |
| APOLPBKG_57 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_58 | 1.0 | 0.0 | 1.0 |
| APOLPBKG_59 | 1.0 | 0.0 | 1.0 |
| APOLPBKG_60 | 1.0 | 0.0 | 1.0 |
| APOLPBKG_66 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_77 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_87 | 0.0 | 1.0 | 0.0 |
| APOLPBKG_92 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| APOLPBKG_11 | 43673 | 65859 | False | Myoviridae | VOG0796, VOG0720, VOG4564, VOG4555, VOG4572, VOG4623, VOG3888, VOG1900, VOG4870, VOG5612, VOG3890, VOG3891, VOG3892, VOG3636, VOG4865, VOG4885, VOG3894, VOG4691, VOG4862, VOG1900, VOG9945, VOG4705, VOG0861, VOG5087 |
| APOLPBKG_11 | 187201 | 219784 | False | Siphoviridae | VOG0321, VOG4548, VOG10660, VOG0322, VOG6545, VOG4632, VOG4609, VOG10510, VOG3307, VOG6970, VOG2188, VOG0327, VOG0198, VOG4841, VOG4581, VOG1886, VOG3644, VOG4556, VOG4573, VOG4553, VOG0204, VOG10939, VOG8997, VOG0207, VOG4586, VOG4760, VOG4633, VOG4659, VOG9945 |
| APOLPBKG_44 | 13715 | 33501 | False | Siphoviridae | VOG1047, VOG0021, VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG4571, VOG1259, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641, VOG9502 |
Phigaro v2.4.0 (Database: Jan. 2024 release)