Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BCDEOFNK_182 | 1 | 229 | Col(MG828) | 229 / 262 | 93.45 | NC008486 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BCDEOFNK_1 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_2 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_3 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_4 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_5 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_6 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_7 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_8 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_9 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_10 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_11 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_12 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_13 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_14 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_15 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_16 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_17 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_18 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_19 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_20 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_21 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_22 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_23 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_24 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_26 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_27 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_28 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_29 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_30 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_31 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_32 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_33 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_34 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_35 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_36 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_37 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_38 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_39 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_40 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_41 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_42 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_43 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_44 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_45 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_46 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_47 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_48 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_49 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_50 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_51 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_52 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_53 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_54 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_55 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_56 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_58 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_59 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_60 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_61 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_62 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_63 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_64 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_65 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_66 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_67 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_68 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_76 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_87 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_98 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_109 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_110 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_121 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_132 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_143 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_154 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_165 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_176 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_187 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_195 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_196 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_197 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_198 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_199 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_200 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_201 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_202 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_203 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_204 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_205 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_206 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_207 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_208 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_209 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_210 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_211 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_212 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_213 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_214 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_215 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_216 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_217 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_218 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_219 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_220 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_221 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_222 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_223 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_224 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_225 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_226 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_227 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_228 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_229 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_230 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_231 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_232 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_233 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_234 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_235 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_236 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_237 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_238 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_239 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_240 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_241 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_242 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_243 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_244 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_245 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_246 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_247 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_248 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_249 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_250 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_251 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_252 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_253 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_254 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_255 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_256 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_257 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_258 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_259 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_260 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_261 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_262 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_263 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_264 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_265 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_266 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_267 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_268 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_269 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_270 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_271 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_272 | 1.0 | 0.0 | 1.0 |
| BCDEOFNK_273 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_274 | 0.0 | 1.0 | 0.0 |
| BCDEOFNK_275 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BCDEOFNK_132 | 10197 | 24377 | False | Siphoviridae | VOG4633, VOG4545, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556 |
| BCDEOFNK_264 | 9100 | 37737 | False | Siphoviridae | VOG4856, VOG4645, VOG4659, VOG4633, VOG4760, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG1329, VOG4555, VOG0686, VOG0692, VOG0691, VOG4544, VOG5532, VOG4618, VOG1177, VOG1422, VOG9702, VOG0198 |
| BCDEOFNK_264 | 39141 | 44753 | False | Siphoviridae | VOG3307, VOG0189, VOG4566, VOG0906, VOG0234, VOG2703, VOG4552, VOG4603 |
Phigaro v2.4.0 (Database: Jan. 2024 release)