Probiotic potential risk score


ARGs VFs PGs PPRS
0000.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
MICCBDNF_110.01.00.0
MICCBDNF_220.01.00.0
MICCBDNF_330.01.00.0
MICCBDNF_441.00.01.0
MICCBDNF_550.01.00.0
MICCBDNF_660.01.00.0
MICCBDNF_770.01.00.0
MICCBDNF_880.01.00.0
MICCBDNF_990.01.00.0
MICCBDNF_1081.00.01.0
MICCBDNF_1090.01.00.0
MICCBDNF_1100.01.00.0
MICCBDNF_1110.01.00.0
MICCBDNF_1120.01.00.0
MICCBDNF_1130.01.00.0
MICCBDNF_1140.01.00.0
MICCBDNF_1150.01.00.0
MICCBDNF_1160.01.00.0
MICCBDNF_1170.01.00.0
MICCBDNF_1180.01.00.0
MICCBDNF_1190.01.00.0
MICCBDNF_1200.01.00.0
MICCBDNF_1210.01.00.0
MICCBDNF_1220.01.00.0
MICCBDNF_1230.01.00.0
MICCBDNF_1240.01.00.0
MICCBDNF_1250.01.00.0
MICCBDNF_1260.01.00.0
MICCBDNF_1270.01.00.0
MICCBDNF_1280.01.00.0
MICCBDNF_1290.01.00.0
MICCBDNF_1301.00.01.0
MICCBDNF_1310.01.00.0
MICCBDNF_1321.00.01.0
MICCBDNF_1330.01.00.0
MICCBDNF_1340.01.00.0
MICCBDNF_1350.01.00.0
MICCBDNF_1360.01.00.0
MICCBDNF_1370.01.00.0
MICCBDNF_1381.00.01.0
MICCBDNF_1390.01.00.0
MICCBDNF_1400.01.00.0
MICCBDNF_1410.01.00.0
MICCBDNF_1420.01.00.0
MICCBDNF_1431.00.01.0
MICCBDNF_1440.01.00.0
MICCBDNF_1450.01.00.0
MICCBDNF_1460.01.00.0
MICCBDNF_1480.01.00.0
MICCBDNF_1490.01.00.0
MICCBDNF_1500.01.00.0
MICCBDNF_1521.00.01.0
MICCBDNF_1530.01.00.0
MICCBDNF_1551.00.01.0
MICCBDNF_1561.00.01.0
MICCBDNF_1571.00.01.0
MICCBDNF_1580.01.00.0
MICCBDNF_1640.01.00.0
MICCBDNF_1750.01.00.0
MICCBDNF_1860.01.00.0
MICCBDNF_1970.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
MICCBDNF_109104841110020FalseSiphoviridaeVOG3711, VOG3459, VOG3685, VOG4602, VOG9667, VOG3622
MICCBDNF_109116337141707FalseSiphoviridaeVOG6005, VOG0275, VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG10939, VOG8997, VOG0207, VOG4586, VOG4760, VOG4633, VOG4659, VOG9945
MICCBDNF_1421624941654FalseMyoviridaeVOG0861, VOG4705, VOG9945, VOG5763, VOG4862, VOG4691, VOG3894, VOG4885, VOG4865, VOG3636, VOG3892, VOG3891, VOG3890, VOG5612, VOG4870, VOG1900, VOG3888, VOG4623, VOG4572, VOG4555, VOG4564, VOG0720, VOG4544, VOG1517, VOG1327, VOG1326, VOG4618, VOG4972, VOG0198
MICCBDNF_1971297332759FalseSiphoviridaeVOG9502, VOG0641, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG1259, VOG4571, VOG0198, VOG4548, VOG0327, VOG4606, VOG0026, VOG0021, VOG1047

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements